Gene : Brara.I03646 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR24058:SF44 - SERINE/THREONINE-PROTEIN KINASE AFC1 Genomic Order:  3646
Name:  ? Brara.I03646 Secondary Identifier:  ? PAC:30642591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03646 0.5kb upstream 0.5kb upstream 3795 true A09: 33956498-33960292 Brassica rapa FPsc
Brara.I03646 0.5kb upstream 0.5kb upstream 500 false A09: 33959793-33960292 Brassica rapa FPsc
Brara.I03646 0.5kb downstream 0.5kb downstream 3795 true A09: 33955998-33959792 Brassica rapa FPsc
Brara.I03646 0.5kb downstream 0.5kb downstream 500 false A09: 33955998-33956497 Brassica rapa FPsc
Brara.I03646 1.0kb upstream 1.0kb upstream 4295 true A09: 33956498-33960792 Brassica rapa FPsc
Brara.I03646 1.0kb upstream 1.0kb upstream 1000 false A09: 33959793-33960792 Brassica rapa FPsc
Brara.I03646 1.0kb downstream 1.0kb downstream 4295 true A09: 33955498-33959792 Brassica rapa FPsc
Brara.I03646 1.0kb downstream 1.0kb downstream 1000 false A09: 33955498-33956497 Brassica rapa FPsc
Brara.I03646 2.0kb upstream 2.0kb upstream 5295 true A09: 33956498-33961792 Brassica rapa FPsc
Brara.I03646 2.0kb upstream 2.0kb upstream 2000 false A09: 33959793-33961792 Brassica rapa FPsc
Brara.I03646 2.0kb downstream 2.0kb downstream 5295 true A09: 33954498-33959792 Brassica rapa FPsc
Brara.I03646 2.0kb downstream 2.0kb downstream 2000 false A09: 33954498-33956497 Brassica rapa FPsc
Brara.I03646 5.0kb upstream 5.0kb upstream 8295 true A09: 33956498-33964792 Brassica rapa FPsc
Brara.I03646 5.0kb upstream 5.0kb upstream 5000 false A09: 33959793-33964792 Brassica rapa FPsc
Brara.I03646 5.0kb downstream 5.0kb downstream 8295 true A09: 33951498-33959792 Brassica rapa FPsc
Brara.I03646 5.0kb downstream 5.0kb downstream 5000 false A09: 33951498-33956497 Brassica rapa FPsc
Brara.I03646 10.0kb upstream 10.0kb upstream 13295 true A09: 33956498-33969792 Brassica rapa FPsc
Brara.I03646 10.0kb upstream 10.0kb upstream 10000 false A09: 33959793-33969792 Brassica rapa FPsc
Brara.I03646 10.0kb downstream 10.0kb downstream 13295 true A09: 33946498-33959792 Brassica rapa FPsc
Brara.I03646 10.0kb downstream 10.0kb downstream 10000 false A09: 33946498-33956497 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353720 5261 Brassicaceae Singleton cluster - no MSA
123792241 5264 Brassicales-Malvales Singleton cluster - no MSA
124290124 5266 SBM Singleton cluster - no MSA
124143323 5268 Malvidae Singleton cluster - no MSA
124071659 5270 Rosid View MSA
123751115 5271 Pentapetalae View MSA
122792813 5272 Eudicot View MSA
122041750 5273 Angiosperm View MSA
121349585 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier