Gene : Brara.I03647 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31689:SF0 - DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC Genomic Order:  3647
Name:  ? Brara.I03647 Secondary Identifier:  ? PAC:30643911
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5097 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-724 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03647 0.5kb upstream 0.5kb upstream 2907 true A09: 33959607-33962513 Brassica rapa FPsc
Brara.I03647 0.5kb upstream 0.5kb upstream 500 false A09: 33959607-33960106 Brassica rapa FPsc
Brara.I03647 0.5kb downstream 0.5kb downstream 2907 true A09: 33960107-33963013 Brassica rapa FPsc
Brara.I03647 0.5kb downstream 0.5kb downstream 500 false A09: 33962514-33963013 Brassica rapa FPsc
Brara.I03647 1.0kb upstream 1.0kb upstream 3407 true A09: 33959107-33962513 Brassica rapa FPsc
Brara.I03647 1.0kb upstream 1.0kb upstream 1000 false A09: 33959107-33960106 Brassica rapa FPsc
Brara.I03647 1.0kb downstream 1.0kb downstream 3407 true A09: 33960107-33963513 Brassica rapa FPsc
Brara.I03647 1.0kb downstream 1.0kb downstream 1000 false A09: 33962514-33963513 Brassica rapa FPsc
Brara.I03647 2.0kb upstream 2.0kb upstream 4407 true A09: 33958107-33962513 Brassica rapa FPsc
Brara.I03647 2.0kb upstream 2.0kb upstream 2000 false A09: 33958107-33960106 Brassica rapa FPsc
Brara.I03647 2.0kb downstream 2.0kb downstream 4407 true A09: 33960107-33964513 Brassica rapa FPsc
Brara.I03647 2.0kb downstream 2.0kb downstream 2000 false A09: 33962514-33964513 Brassica rapa FPsc
Brara.I03647 5.0kb upstream 5.0kb upstream 7407 true A09: 33955107-33962513 Brassica rapa FPsc
Brara.I03647 5.0kb upstream 5.0kb upstream 5000 false A09: 33955107-33960106 Brassica rapa FPsc
Brara.I03647 5.0kb downstream 5.0kb downstream 7407 true A09: 33960107-33967513 Brassica rapa FPsc
Brara.I03647 5.0kb downstream 5.0kb downstream 5000 false A09: 33962514-33967513 Brassica rapa FPsc
Brara.I03647 10.0kb upstream 10.0kb upstream 12407 true A09: 33950107-33962513 Brassica rapa FPsc
Brara.I03647 10.0kb upstream 10.0kb upstream 10000 false A09: 33950107-33960106 Brassica rapa FPsc
Brara.I03647 10.0kb downstream 10.0kb downstream 12407 true A09: 33960107-33972513 Brassica rapa FPsc
Brara.I03647 10.0kb downstream 10.0kb downstream 10000 false A09: 33962514-33972513 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373276 5261 Brassicaceae View MSA
123838616 5264 Brassicales-Malvales View MSA
124341400 5266 SBM View MSA
124243364 5268 Malvidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier