Gene : Brara.E02004 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23133 - IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 Genomic Order:  2004
Name:  ? Brara.E02004 Secondary Identifier:  ? PAC:30627154
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HISTSYN-PWY Brassica rapa FPsc pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02004 0.5kb upstream 0.5kb upstream 2523 true A05: 18249012-18251534 Brassica rapa FPsc
Brara.E02004 0.5kb upstream 0.5kb upstream 500 false A05: 18251035-18251534 Brassica rapa FPsc
Brara.E02004 0.5kb downstream 0.5kb downstream 2523 true A05: 18248512-18251034 Brassica rapa FPsc
Brara.E02004 0.5kb downstream 0.5kb downstream 500 false A05: 18248512-18249011 Brassica rapa FPsc
Brara.E02004 1.0kb upstream 1.0kb upstream 3023 true A05: 18249012-18252034 Brassica rapa FPsc
Brara.E02004 1.0kb upstream 1.0kb upstream 1000 false A05: 18251035-18252034 Brassica rapa FPsc
Brara.E02004 1.0kb downstream 1.0kb downstream 3023 true A05: 18248012-18251034 Brassica rapa FPsc
Brara.E02004 1.0kb downstream 1.0kb downstream 1000 false A05: 18248012-18249011 Brassica rapa FPsc
Brara.E02004 2.0kb upstream 2.0kb upstream 4023 true A05: 18249012-18253034 Brassica rapa FPsc
Brara.E02004 2.0kb upstream 2.0kb upstream 2000 false A05: 18251035-18253034 Brassica rapa FPsc
Brara.E02004 2.0kb downstream 2.0kb downstream 4023 true A05: 18247012-18251034 Brassica rapa FPsc
Brara.E02004 2.0kb downstream 2.0kb downstream 2000 false A05: 18247012-18249011 Brassica rapa FPsc
Brara.E02004 5.0kb upstream 5.0kb upstream 7023 true A05: 18249012-18256034 Brassica rapa FPsc
Brara.E02004 5.0kb upstream 5.0kb upstream 5000 false A05: 18251035-18256034 Brassica rapa FPsc
Brara.E02004 5.0kb downstream 5.0kb downstream 7023 true A05: 18244012-18251034 Brassica rapa FPsc
Brara.E02004 5.0kb downstream 5.0kb downstream 5000 false A05: 18244012-18249011 Brassica rapa FPsc
Brara.E02004 10.0kb upstream 10.0kb upstream 12023 true A05: 18249012-18261034 Brassica rapa FPsc
Brara.E02004 10.0kb upstream 10.0kb upstream 10000 false A05: 18251035-18261034 Brassica rapa FPsc
Brara.E02004 10.0kb downstream 10.0kb downstream 12023 true A05: 18239012-18251034 Brassica rapa FPsc
Brara.E02004 10.0kb downstream 10.0kb downstream 10000 false A05: 18239012-18249011 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378389 5261 Brassicaceae View MSA
123833237 5264 Brassicales-Malvales View MSA
124344750 5266 SBM View MSA
124241761 5268 Malvidae View MSA
124067658 5270 Rosid View MSA
123737408 5271 Pentapetalae View MSA
122786767 5272 Eudicot View MSA
122045110 5273 Angiosperm View MSA
121344413 5274 Embryophyte View MSA
123423926 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier