Gene : Brara.C00576 B. rapa FPsc v1.3
Defline:  (1 of 25) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  576
Name:  ? Brara.C00576 Secondary Identifier:  ? PAC:30618944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00576 0.5kb upstream 0.5kb upstream 2892 true A03: 2700957-2703848 Brassica rapa FPsc
Brara.C00576 0.5kb upstream 0.5kb upstream 500 false A03: 2700957-2701456 Brassica rapa FPsc
Brara.C00576 0.5kb downstream 0.5kb downstream 2892 true A03: 2701457-2704348 Brassica rapa FPsc
Brara.C00576 0.5kb downstream 0.5kb downstream 500 false A03: 2703849-2704348 Brassica rapa FPsc
Brara.C00576 1.0kb upstream 1.0kb upstream 3392 true A03: 2700457-2703848 Brassica rapa FPsc
Brara.C00576 1.0kb upstream 1.0kb upstream 1000 false A03: 2700457-2701456 Brassica rapa FPsc
Brara.C00576 1.0kb downstream 1.0kb downstream 3392 true A03: 2701457-2704848 Brassica rapa FPsc
Brara.C00576 1.0kb downstream 1.0kb downstream 1000 false A03: 2703849-2704848 Brassica rapa FPsc
Brara.C00576 2.0kb upstream 2.0kb upstream 4392 true A03: 2699457-2703848 Brassica rapa FPsc
Brara.C00576 2.0kb upstream 2.0kb upstream 2000 false A03: 2699457-2701456 Brassica rapa FPsc
Brara.C00576 2.0kb downstream 2.0kb downstream 4392 true A03: 2701457-2705848 Brassica rapa FPsc
Brara.C00576 2.0kb downstream 2.0kb downstream 2000 false A03: 2703849-2705848 Brassica rapa FPsc
Brara.C00576 5.0kb upstream 5.0kb upstream 7392 true A03: 2696457-2703848 Brassica rapa FPsc
Brara.C00576 5.0kb upstream 5.0kb upstream 5000 false A03: 2696457-2701456 Brassica rapa FPsc
Brara.C00576 5.0kb downstream 5.0kb downstream 7392 true A03: 2701457-2708848 Brassica rapa FPsc
Brara.C00576 5.0kb downstream 5.0kb downstream 5000 false A03: 2703849-2708848 Brassica rapa FPsc
Brara.C00576 10.0kb upstream 10.0kb upstream 12392 true A03: 2691457-2703848 Brassica rapa FPsc
Brara.C00576 10.0kb upstream 10.0kb upstream 10000 false A03: 2691457-2701456 Brassica rapa FPsc
Brara.C00576 10.0kb downstream 10.0kb downstream 12392 true A03: 2701457-2713848 Brassica rapa FPsc
Brara.C00576 10.0kb downstream 10.0kb downstream 10000 false A03: 2703849-2713848 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363746 5261 Brassicaceae View MSA
123838256 5264 Brassicales-Malvales View MSA
124351593 5266 SBM View MSA
124244073 5268 Malvidae View MSA
124072132 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier