Gene : Brara.C00587 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31062:SF15 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  587
Name:  ? Brara.C00587 Secondary Identifier:  ? PAC:30618198
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00587 0.5kb upstream 0.5kb upstream 3163 true A03: 2741181-2744343 Brassica rapa FPsc
Brara.C00587 0.5kb upstream 0.5kb upstream 500 false A03: 2743844-2744343 Brassica rapa FPsc
Brara.C00587 0.5kb downstream 0.5kb downstream 3163 true A03: 2740681-2743843 Brassica rapa FPsc
Brara.C00587 0.5kb downstream 0.5kb downstream 500 false A03: 2740681-2741180 Brassica rapa FPsc
Brara.C00587 1.0kb upstream 1.0kb upstream 3663 true A03: 2741181-2744843 Brassica rapa FPsc
Brara.C00587 1.0kb upstream 1.0kb upstream 1000 false A03: 2743844-2744843 Brassica rapa FPsc
Brara.C00587 1.0kb downstream 1.0kb downstream 3663 true A03: 2740181-2743843 Brassica rapa FPsc
Brara.C00587 1.0kb downstream 1.0kb downstream 1000 false A03: 2740181-2741180 Brassica rapa FPsc
Brara.C00587 2.0kb upstream 2.0kb upstream 4663 true A03: 2741181-2745843 Brassica rapa FPsc
Brara.C00587 2.0kb upstream 2.0kb upstream 2000 false A03: 2743844-2745843 Brassica rapa FPsc
Brara.C00587 2.0kb downstream 2.0kb downstream 4663 true A03: 2739181-2743843 Brassica rapa FPsc
Brara.C00587 2.0kb downstream 2.0kb downstream 2000 false A03: 2739181-2741180 Brassica rapa FPsc
Brara.C00587 5.0kb upstream 5.0kb upstream 7663 true A03: 2741181-2748843 Brassica rapa FPsc
Brara.C00587 5.0kb upstream 5.0kb upstream 5000 false A03: 2743844-2748843 Brassica rapa FPsc
Brara.C00587 5.0kb downstream 5.0kb downstream 7663 true A03: 2736181-2743843 Brassica rapa FPsc
Brara.C00587 5.0kb downstream 5.0kb downstream 5000 false A03: 2736181-2741180 Brassica rapa FPsc
Brara.C00587 10.0kb upstream 10.0kb upstream 12663 true A03: 2741181-2753843 Brassica rapa FPsc
Brara.C00587 10.0kb upstream 10.0kb upstream 10000 false A03: 2743844-2753843 Brassica rapa FPsc
Brara.C00587 10.0kb downstream 10.0kb downstream 12663 true A03: 2731181-2743843 Brassica rapa FPsc
Brara.C00587 10.0kb downstream 10.0kb downstream 10000 false A03: 2731181-2741180 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347716 5261 Brassicaceae Singleton cluster - no MSA
123787188 5264 Brassicales-Malvales Singleton cluster - no MSA
124285273 5266 SBM Singleton cluster - no MSA
124251973 5268 Malvidae View MSA
124063834 5270 Rosid View MSA
123740091 5271 Pentapetalae View MSA
122795119 5272 Eudicot View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier