Gene : Brara.C00638 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Genomic Order:  638
Name:  ? Brara.C00638 Secondary Identifier:  ? PAC:30615461
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARG-PRO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PROSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3341 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00638 0.5kb upstream 0.5kb upstream 2309 true A03: 2942595-2944903 Brassica rapa FPsc
Brara.C00638 0.5kb upstream 0.5kb upstream 500 false A03: 2944404-2944903 Brassica rapa FPsc
Brara.C00638 0.5kb downstream 0.5kb downstream 2309 true A03: 2942095-2944403 Brassica rapa FPsc
Brara.C00638 0.5kb downstream 0.5kb downstream 500 false A03: 2942095-2942594 Brassica rapa FPsc
Brara.C00638 1.0kb upstream 1.0kb upstream 2809 true A03: 2942595-2945403 Brassica rapa FPsc
Brara.C00638 1.0kb upstream 1.0kb upstream 1000 false A03: 2944404-2945403 Brassica rapa FPsc
Brara.C00638 1.0kb downstream 1.0kb downstream 2809 true A03: 2941595-2944403 Brassica rapa FPsc
Brara.C00638 1.0kb downstream 1.0kb downstream 1000 false A03: 2941595-2942594 Brassica rapa FPsc
Brara.C00638 2.0kb upstream 2.0kb upstream 3809 true A03: 2942595-2946403 Brassica rapa FPsc
Brara.C00638 2.0kb upstream 2.0kb upstream 2000 false A03: 2944404-2946403 Brassica rapa FPsc
Brara.C00638 2.0kb downstream 2.0kb downstream 3809 true A03: 2940595-2944403 Brassica rapa FPsc
Brara.C00638 2.0kb downstream 2.0kb downstream 2000 false A03: 2940595-2942594 Brassica rapa FPsc
Brara.C00638 5.0kb upstream 5.0kb upstream 6809 true A03: 2942595-2949403 Brassica rapa FPsc
Brara.C00638 5.0kb upstream 5.0kb upstream 5000 false A03: 2944404-2949403 Brassica rapa FPsc
Brara.C00638 5.0kb downstream 5.0kb downstream 6809 true A03: 2937595-2944403 Brassica rapa FPsc
Brara.C00638 5.0kb downstream 5.0kb downstream 5000 false A03: 2937595-2942594 Brassica rapa FPsc
Brara.C00638 10.0kb upstream 10.0kb upstream 11809 true A03: 2942595-2954403 Brassica rapa FPsc
Brara.C00638 10.0kb upstream 10.0kb upstream 10000 false A03: 2944404-2954403 Brassica rapa FPsc
Brara.C00638 10.0kb downstream 10.0kb downstream 11809 true A03: 2932595-2944403 Brassica rapa FPsc
Brara.C00638 10.0kb downstream 10.0kb downstream 10000 false A03: 2932595-2942594 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346941 5261 Brassicaceae Singleton cluster - no MSA
123786551 5264 Brassicales-Malvales Singleton cluster - no MSA
124284653 5266 SBM Singleton cluster - no MSA
124250684 5268 Malvidae View MSA
124061027 5270 Rosid View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier