Gene : Brara.C00481 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11995 - NADH DEHYDROGENASE Genomic Order:  481
Name:  ? Brara.C00481 Secondary Identifier:  ? PAC:30615923
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5083 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00481 0.5kb upstream 0.5kb upstream 2520 true A03: 2273442-2275961 Brassica rapa FPsc
Brara.C00481 0.5kb upstream 0.5kb upstream 500 false A03: 2275462-2275961 Brassica rapa FPsc
Brara.C00481 0.5kb downstream 0.5kb downstream 2520 true A03: 2272942-2275461 Brassica rapa FPsc
Brara.C00481 0.5kb downstream 0.5kb downstream 500 false A03: 2272942-2273441 Brassica rapa FPsc
Brara.C00481 1.0kb upstream 1.0kb upstream 3020 true A03: 2273442-2276461 Brassica rapa FPsc
Brara.C00481 1.0kb upstream 1.0kb upstream 1000 false A03: 2275462-2276461 Brassica rapa FPsc
Brara.C00481 1.0kb downstream 1.0kb downstream 3020 true A03: 2272442-2275461 Brassica rapa FPsc
Brara.C00481 1.0kb downstream 1.0kb downstream 1000 false A03: 2272442-2273441 Brassica rapa FPsc
Brara.C00481 2.0kb upstream 2.0kb upstream 4020 true A03: 2273442-2277461 Brassica rapa FPsc
Brara.C00481 2.0kb upstream 2.0kb upstream 2000 false A03: 2275462-2277461 Brassica rapa FPsc
Brara.C00481 2.0kb downstream 2.0kb downstream 4020 true A03: 2271442-2275461 Brassica rapa FPsc
Brara.C00481 2.0kb downstream 2.0kb downstream 2000 false A03: 2271442-2273441 Brassica rapa FPsc
Brara.C00481 5.0kb upstream 5.0kb upstream 7020 true A03: 2273442-2280461 Brassica rapa FPsc
Brara.C00481 5.0kb upstream 5.0kb upstream 5000 false A03: 2275462-2280461 Brassica rapa FPsc
Brara.C00481 5.0kb downstream 5.0kb downstream 7020 true A03: 2268442-2275461 Brassica rapa FPsc
Brara.C00481 5.0kb downstream 5.0kb downstream 5000 false A03: 2268442-2273441 Brassica rapa FPsc
Brara.C00481 10.0kb upstream 10.0kb upstream 12020 true A03: 2273442-2285461 Brassica rapa FPsc
Brara.C00481 10.0kb upstream 10.0kb upstream 10000 false A03: 2275462-2285461 Brassica rapa FPsc
Brara.C00481 10.0kb downstream 10.0kb downstream 12020 true A03: 2263442-2275461 Brassica rapa FPsc
Brara.C00481 10.0kb downstream 10.0kb downstream 10000 false A03: 2263442-2273441 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041386 5273 Angiosperm View MSA
122347063 5261 Brassicaceae Singleton cluster - no MSA
123842768 5264 Brassicales-Malvales View MSA
124350189 5266 SBM View MSA
124250688 5268 Malvidae View MSA
124062804 5270 Rosid View MSA
123752382 5271 Pentapetalae View MSA
122791992 5272 Eudicot View MSA
121350151 5274 Embryophyte View MSA
123428091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier