Gene : Brara.I05117 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  5117
Name:  ? Brara.I05117 Secondary Identifier:  ? PAC:30641413
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05117 0.5kb upstream 0.5kb upstream 1398 true A09: 42220767-42222164 Brassica rapa FPsc
Brara.I05117 0.5kb upstream 0.5kb upstream 500 false A09: 42221665-42222164 Brassica rapa FPsc
Brara.I05117 0.5kb downstream 0.5kb downstream 1398 true A09: 42220267-42221664 Brassica rapa FPsc
Brara.I05117 0.5kb downstream 0.5kb downstream 500 false A09: 42220267-42220766 Brassica rapa FPsc
Brara.I05117 1.0kb upstream 1.0kb upstream 1898 true A09: 42220767-42222664 Brassica rapa FPsc
Brara.I05117 1.0kb upstream 1.0kb upstream 1000 false A09: 42221665-42222664 Brassica rapa FPsc
Brara.I05117 1.0kb downstream 1.0kb downstream 1898 true A09: 42219767-42221664 Brassica rapa FPsc
Brara.I05117 1.0kb downstream 1.0kb downstream 1000 false A09: 42219767-42220766 Brassica rapa FPsc
Brara.I05117 2.0kb upstream 2.0kb upstream 2898 true A09: 42220767-42223664 Brassica rapa FPsc
Brara.I05117 2.0kb upstream 2.0kb upstream 2000 false A09: 42221665-42223664 Brassica rapa FPsc
Brara.I05117 2.0kb downstream 2.0kb downstream 2898 true A09: 42218767-42221664 Brassica rapa FPsc
Brara.I05117 2.0kb downstream 2.0kb downstream 2000 false A09: 42218767-42220766 Brassica rapa FPsc
Brara.I05117 5.0kb upstream 5.0kb upstream 5898 true A09: 42220767-42226664 Brassica rapa FPsc
Brara.I05117 5.0kb upstream 5.0kb upstream 5000 false A09: 42221665-42226664 Brassica rapa FPsc
Brara.I05117 5.0kb downstream 5.0kb downstream 5898 true A09: 42215767-42221664 Brassica rapa FPsc
Brara.I05117 5.0kb downstream 5.0kb downstream 5000 false A09: 42215767-42220766 Brassica rapa FPsc
Brara.I05117 10.0kb upstream 10.0kb upstream 10898 true A09: 42220767-42231664 Brassica rapa FPsc
Brara.I05117 10.0kb upstream 10.0kb upstream 10000 false A09: 42221665-42231664 Brassica rapa FPsc
Brara.I05117 10.0kb downstream 10.0kb downstream 10898 true A09: 42210767-42221664 Brassica rapa FPsc
Brara.I05117 10.0kb downstream 10.0kb downstream 10000 false A09: 42210767-42220766 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381235 5261 Brassicaceae View MSA
123835843 5264 Brassicales-Malvales View MSA
124341582 5266 SBM View MSA
124248925 5268 Malvidae View MSA
124061423 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier