Gene : Brara.E01945 B. rapa FPsc v1.3
Defline:  (1 of 2) 3.6.1.31 - Phosphoribosyl-ATP diphosphatase / Phosphoribosyladenosine triphosphate pyrophosphatase Genomic Order:  1945
Name:  ? Brara.E01945 Secondary Identifier:  ? PAC:30626508
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HISTSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01945 0.5kb upstream 0.5kb upstream 2452 true A05: 17535653-17538104 Brassica rapa FPsc
Brara.E01945 0.5kb upstream 0.5kb upstream 500 false A05: 17535653-17536152 Brassica rapa FPsc
Brara.E01945 0.5kb downstream 0.5kb downstream 2452 true A05: 17536153-17538604 Brassica rapa FPsc
Brara.E01945 0.5kb downstream 0.5kb downstream 500 false A05: 17538105-17538604 Brassica rapa FPsc
Brara.E01945 1.0kb upstream 1.0kb upstream 2952 true A05: 17535153-17538104 Brassica rapa FPsc
Brara.E01945 1.0kb upstream 1.0kb upstream 1000 false A05: 17535153-17536152 Brassica rapa FPsc
Brara.E01945 1.0kb downstream 1.0kb downstream 2952 true A05: 17536153-17539104 Brassica rapa FPsc
Brara.E01945 1.0kb downstream 1.0kb downstream 1000 false A05: 17538105-17539104 Brassica rapa FPsc
Brara.E01945 2.0kb upstream 2.0kb upstream 3952 true A05: 17534153-17538104 Brassica rapa FPsc
Brara.E01945 2.0kb upstream 2.0kb upstream 2000 false A05: 17534153-17536152 Brassica rapa FPsc
Brara.E01945 2.0kb downstream 2.0kb downstream 3952 true A05: 17536153-17540104 Brassica rapa FPsc
Brara.E01945 2.0kb downstream 2.0kb downstream 2000 false A05: 17538105-17540104 Brassica rapa FPsc
Brara.E01945 5.0kb upstream 5.0kb upstream 6952 true A05: 17531153-17538104 Brassica rapa FPsc
Brara.E01945 5.0kb upstream 5.0kb upstream 5000 false A05: 17531153-17536152 Brassica rapa FPsc
Brara.E01945 5.0kb downstream 5.0kb downstream 6952 true A05: 17536153-17543104 Brassica rapa FPsc
Brara.E01945 5.0kb downstream 5.0kb downstream 5000 false A05: 17538105-17543104 Brassica rapa FPsc
Brara.E01945 10.0kb upstream 10.0kb upstream 11952 true A05: 17526153-17538104 Brassica rapa FPsc
Brara.E01945 10.0kb upstream 10.0kb upstream 10000 false A05: 17526153-17536152 Brassica rapa FPsc
Brara.E01945 10.0kb downstream 10.0kb downstream 11952 true A05: 17536153-17548104 Brassica rapa FPsc
Brara.E01945 10.0kb downstream 10.0kb downstream 10000 false A05: 17538105-17548104 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373728 5261 Brassicaceae View MSA
123839923 5264 Brassicales-Malvales View MSA
124337833 5266 SBM View MSA
124254023 5268 Malvidae View MSA
124060953 5270 Rosid View MSA
123746626 5271 Pentapetalae View MSA
122789417 5272 Eudicot View MSA
122047358 5273 Angiosperm View MSA
121345826 5274 Embryophyte View MSA
123423910 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier