Gene : Brara.I04942 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12707 - PINN Genomic Order:  4942
Name:  ? Brara.I04942 Secondary Identifier:  ? PAC:30644202
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04942 0.5kb upstream 0.5kb upstream 2712 true A09: 41351604-41354315 Brassica rapa FPsc
Brara.I04942 0.5kb upstream 0.5kb upstream 500 false A09: 41351604-41352103 Brassica rapa FPsc
Brara.I04942 0.5kb downstream 0.5kb downstream 2712 true A09: 41352104-41354815 Brassica rapa FPsc
Brara.I04942 0.5kb downstream 0.5kb downstream 500 false A09: 41354316-41354815 Brassica rapa FPsc
Brara.I04942 1.0kb upstream 1.0kb upstream 3212 true A09: 41351104-41354315 Brassica rapa FPsc
Brara.I04942 1.0kb upstream 1.0kb upstream 1000 false A09: 41351104-41352103 Brassica rapa FPsc
Brara.I04942 1.0kb downstream 1.0kb downstream 3212 true A09: 41352104-41355315 Brassica rapa FPsc
Brara.I04942 1.0kb downstream 1.0kb downstream 1000 false A09: 41354316-41355315 Brassica rapa FPsc
Brara.I04942 2.0kb upstream 2.0kb upstream 4212 true A09: 41350104-41354315 Brassica rapa FPsc
Brara.I04942 2.0kb upstream 2.0kb upstream 2000 false A09: 41350104-41352103 Brassica rapa FPsc
Brara.I04942 2.0kb downstream 2.0kb downstream 4212 true A09: 41352104-41356315 Brassica rapa FPsc
Brara.I04942 2.0kb downstream 2.0kb downstream 2000 false A09: 41354316-41356315 Brassica rapa FPsc
Brara.I04942 5.0kb upstream 5.0kb upstream 7212 true A09: 41347104-41354315 Brassica rapa FPsc
Brara.I04942 5.0kb upstream 5.0kb upstream 5000 false A09: 41347104-41352103 Brassica rapa FPsc
Brara.I04942 5.0kb downstream 5.0kb downstream 7212 true A09: 41352104-41359315 Brassica rapa FPsc
Brara.I04942 5.0kb downstream 5.0kb downstream 5000 false A09: 41354316-41359315 Brassica rapa FPsc
Brara.I04942 10.0kb upstream 10.0kb upstream 12212 true A09: 41342104-41354315 Brassica rapa FPsc
Brara.I04942 10.0kb upstream 10.0kb upstream 10000 false A09: 41342104-41352103 Brassica rapa FPsc
Brara.I04942 10.0kb downstream 10.0kb downstream 12212 true A09: 41352104-41364315 Brassica rapa FPsc
Brara.I04942 10.0kb downstream 10.0kb downstream 10000 false A09: 41354316-41364315 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121507050 5273 Angiosperm Singleton cluster - no MSA
122354095 5261 Brassicaceae Singleton cluster - no MSA
123792546 5264 Brassicales-Malvales Singleton cluster - no MSA
124290420 5266 SBM Singleton cluster - no MSA
124143564 5268 Malvidae Singleton cluster - no MSA
123870250 5270 Rosid Singleton cluster - no MSA
123454693 5271 Pentapetalae Singleton cluster - no MSA
122490136 5272 Eudicot Singleton cluster - no MSA
120780219 5274 Embryophyte Singleton cluster - no MSA
123426416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier