Gene : Brara.I04948 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  4948
Name:  ? Brara.I04948 Secondary Identifier:  ? PAC:30641292
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRIGLSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04948 0.5kb upstream 0.5kb upstream 2817 true A09: 41384968-41387784 Brassica rapa FPsc
Brara.I04948 0.5kb upstream 0.5kb upstream 500 false A09: 41387285-41387784 Brassica rapa FPsc
Brara.I04948 0.5kb downstream 0.5kb downstream 2817 true A09: 41384468-41387284 Brassica rapa FPsc
Brara.I04948 0.5kb downstream 0.5kb downstream 500 false A09: 41384468-41384967 Brassica rapa FPsc
Brara.I04948 1.0kb upstream 1.0kb upstream 3317 true A09: 41384968-41388284 Brassica rapa FPsc
Brara.I04948 1.0kb upstream 1.0kb upstream 1000 false A09: 41387285-41388284 Brassica rapa FPsc
Brara.I04948 1.0kb downstream 1.0kb downstream 3317 true A09: 41383968-41387284 Brassica rapa FPsc
Brara.I04948 1.0kb downstream 1.0kb downstream 1000 false A09: 41383968-41384967 Brassica rapa FPsc
Brara.I04948 2.0kb upstream 2.0kb upstream 4317 true A09: 41384968-41389284 Brassica rapa FPsc
Brara.I04948 2.0kb upstream 2.0kb upstream 2000 false A09: 41387285-41389284 Brassica rapa FPsc
Brara.I04948 2.0kb downstream 2.0kb downstream 4317 true A09: 41382968-41387284 Brassica rapa FPsc
Brara.I04948 2.0kb downstream 2.0kb downstream 2000 false A09: 41382968-41384967 Brassica rapa FPsc
Brara.I04948 5.0kb upstream 5.0kb upstream 7317 true A09: 41384968-41392284 Brassica rapa FPsc
Brara.I04948 5.0kb upstream 5.0kb upstream 5000 false A09: 41387285-41392284 Brassica rapa FPsc
Brara.I04948 5.0kb downstream 5.0kb downstream 7317 true A09: 41379968-41387284 Brassica rapa FPsc
Brara.I04948 5.0kb downstream 5.0kb downstream 5000 false A09: 41379968-41384967 Brassica rapa FPsc
Brara.I04948 10.0kb upstream 10.0kb upstream 12317 true A09: 41384968-41397284 Brassica rapa FPsc
Brara.I04948 10.0kb upstream 10.0kb upstream 10000 false A09: 41387285-41397284 Brassica rapa FPsc
Brara.I04948 10.0kb downstream 10.0kb downstream 12317 true A09: 41374968-41387284 Brassica rapa FPsc
Brara.I04948 10.0kb downstream 10.0kb downstream 10000 false A09: 41374968-41384967 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364782 5261 Brassicaceae View MSA
123833080 5264 Brassicales-Malvales View MSA
124343832 5266 SBM View MSA
124242855 5268 Malvidae View MSA
124064865 5270 Rosid View MSA
123740840 5271 Pentapetalae View MSA
122793689 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier