Gene : Brara.I04982 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31388:SF37 - PEROXIDASE 4-RELATED Genomic Order:  4982
Name:  ? Brara.I04982 Secondary Identifier:  ? PAC:30645754
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04982 0.5kb upstream 0.5kb upstream 2010 true A09: 41561031-41563040 Brassica rapa FPsc
Brara.I04982 0.5kb upstream 0.5kb upstream 500 false A09: 41561031-41561530 Brassica rapa FPsc
Brara.I04982 0.5kb downstream 0.5kb downstream 2010 true A09: 41561531-41563540 Brassica rapa FPsc
Brara.I04982 0.5kb downstream 0.5kb downstream 500 false A09: 41563041-41563540 Brassica rapa FPsc
Brara.I04982 1.0kb upstream 1.0kb upstream 2510 true A09: 41560531-41563040 Brassica rapa FPsc
Brara.I04982 1.0kb upstream 1.0kb upstream 1000 false A09: 41560531-41561530 Brassica rapa FPsc
Brara.I04982 1.0kb downstream 1.0kb downstream 2510 true A09: 41561531-41564040 Brassica rapa FPsc
Brara.I04982 1.0kb downstream 1.0kb downstream 1000 false A09: 41563041-41564040 Brassica rapa FPsc
Brara.I04982 2.0kb upstream 2.0kb upstream 3510 true A09: 41559531-41563040 Brassica rapa FPsc
Brara.I04982 2.0kb upstream 2.0kb upstream 2000 false A09: 41559531-41561530 Brassica rapa FPsc
Brara.I04982 2.0kb downstream 2.0kb downstream 3510 true A09: 41561531-41565040 Brassica rapa FPsc
Brara.I04982 2.0kb downstream 2.0kb downstream 2000 false A09: 41563041-41565040 Brassica rapa FPsc
Brara.I04982 5.0kb upstream 5.0kb upstream 6510 true A09: 41556531-41563040 Brassica rapa FPsc
Brara.I04982 5.0kb upstream 5.0kb upstream 5000 false A09: 41556531-41561530 Brassica rapa FPsc
Brara.I04982 5.0kb downstream 5.0kb downstream 6510 true A09: 41561531-41568040 Brassica rapa FPsc
Brara.I04982 5.0kb downstream 5.0kb downstream 5000 false A09: 41563041-41568040 Brassica rapa FPsc
Brara.I04982 10.0kb upstream 10.0kb upstream 11510 true A09: 41551531-41563040 Brassica rapa FPsc
Brara.I04982 10.0kb upstream 10.0kb upstream 10000 false A09: 41551531-41561530 Brassica rapa FPsc
Brara.I04982 10.0kb downstream 10.0kb downstream 11510 true A09: 41561531-41573040 Brassica rapa FPsc
Brara.I04982 10.0kb downstream 10.0kb downstream 10000 false A09: 41563041-41573040 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378530 5261 Brassicaceae View MSA
123836938 5264 Brassicales-Malvales View MSA
124322227 5266 SBM View MSA
124249111 5268 Malvidae View MSA
124068770 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier