Gene : Brara.I04836 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11751//PTHR11751:SF369 - SUBGROUP I AMINOTRANSFERASE RELATED Genomic Order:  4836
Name:  ? Brara.I04836 Secondary Identifier:  ? PAC:30645717
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ALANINE-DEG3-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ALANINE-SYN2-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04836 0.5kb upstream 0.5kb upstream 3701 true A09: 40889507-40893207 Brassica rapa FPsc
Brara.I04836 0.5kb upstream 0.5kb upstream 500 false A09: 40892708-40893207 Brassica rapa FPsc
Brara.I04836 0.5kb downstream 0.5kb downstream 3701 true A09: 40889007-40892707 Brassica rapa FPsc
Brara.I04836 0.5kb downstream 0.5kb downstream 500 false A09: 40889007-40889506 Brassica rapa FPsc
Brara.I04836 1.0kb upstream 1.0kb upstream 4201 true A09: 40889507-40893707 Brassica rapa FPsc
Brara.I04836 1.0kb upstream 1.0kb upstream 1000 false A09: 40892708-40893707 Brassica rapa FPsc
Brara.I04836 1.0kb downstream 1.0kb downstream 4201 true A09: 40888507-40892707 Brassica rapa FPsc
Brara.I04836 1.0kb downstream 1.0kb downstream 1000 false A09: 40888507-40889506 Brassica rapa FPsc
Brara.I04836 2.0kb upstream 2.0kb upstream 5201 true A09: 40889507-40894707 Brassica rapa FPsc
Brara.I04836 2.0kb upstream 2.0kb upstream 2000 false A09: 40892708-40894707 Brassica rapa FPsc
Brara.I04836 2.0kb downstream 2.0kb downstream 5201 true A09: 40887507-40892707 Brassica rapa FPsc
Brara.I04836 2.0kb downstream 2.0kb downstream 2000 false A09: 40887507-40889506 Brassica rapa FPsc
Brara.I04836 5.0kb upstream 5.0kb upstream 8201 true A09: 40889507-40897707 Brassica rapa FPsc
Brara.I04836 5.0kb upstream 5.0kb upstream 5000 false A09: 40892708-40897707 Brassica rapa FPsc
Brara.I04836 5.0kb downstream 5.0kb downstream 8201 true A09: 40884507-40892707 Brassica rapa FPsc
Brara.I04836 5.0kb downstream 5.0kb downstream 5000 false A09: 40884507-40889506 Brassica rapa FPsc
Brara.I04836 10.0kb upstream 10.0kb upstream 13201 true A09: 40889507-40902707 Brassica rapa FPsc
Brara.I04836 10.0kb upstream 10.0kb upstream 10000 false A09: 40892708-40902707 Brassica rapa FPsc
Brara.I04836 10.0kb downstream 10.0kb downstream 13201 true A09: 40879507-40892707 Brassica rapa FPsc
Brara.I04836 10.0kb downstream 10.0kb downstream 10000 false A09: 40879507-40889506 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366358 5261 Brassicaceae View MSA
123836852 5264 Brassicales-Malvales View MSA
124344699 5266 SBM View MSA
124251764 5268 Malvidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier