Gene : Brara.C00345 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR12714:SF4 - FAD SYNTHETASE RIBF1 Genomic Order:  345
Name:  ? Brara.C00345 Secondary Identifier:  ? PAC:30615953
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc RIBOSYN2-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00345 0.5kb upstream 0.5kb upstream 2318 true A03: 1656396-1658713 Brassica rapa FPsc
Brara.C00345 0.5kb upstream 0.5kb upstream 500 false A03: 1656396-1656895 Brassica rapa FPsc
Brara.C00345 0.5kb downstream 0.5kb downstream 2318 true A03: 1656896-1659213 Brassica rapa FPsc
Brara.C00345 0.5kb downstream 0.5kb downstream 500 false A03: 1658714-1659213 Brassica rapa FPsc
Brara.C00345 1.0kb upstream 1.0kb upstream 2818 true A03: 1655896-1658713 Brassica rapa FPsc
Brara.C00345 1.0kb upstream 1.0kb upstream 1000 false A03: 1655896-1656895 Brassica rapa FPsc
Brara.C00345 1.0kb downstream 1.0kb downstream 2818 true A03: 1656896-1659713 Brassica rapa FPsc
Brara.C00345 1.0kb downstream 1.0kb downstream 1000 false A03: 1658714-1659713 Brassica rapa FPsc
Brara.C00345 2.0kb upstream 2.0kb upstream 3818 true A03: 1654896-1658713 Brassica rapa FPsc
Brara.C00345 2.0kb upstream 2.0kb upstream 2000 false A03: 1654896-1656895 Brassica rapa FPsc
Brara.C00345 2.0kb downstream 2.0kb downstream 3818 true A03: 1656896-1660713 Brassica rapa FPsc
Brara.C00345 2.0kb downstream 2.0kb downstream 2000 false A03: 1658714-1660713 Brassica rapa FPsc
Brara.C00345 5.0kb upstream 5.0kb upstream 6818 true A03: 1651896-1658713 Brassica rapa FPsc
Brara.C00345 5.0kb upstream 5.0kb upstream 5000 false A03: 1651896-1656895 Brassica rapa FPsc
Brara.C00345 5.0kb downstream 5.0kb downstream 6818 true A03: 1656896-1663713 Brassica rapa FPsc
Brara.C00345 5.0kb downstream 5.0kb downstream 5000 false A03: 1658714-1663713 Brassica rapa FPsc
Brara.C00345 10.0kb upstream 10.0kb upstream 11818 true A03: 1646896-1658713 Brassica rapa FPsc
Brara.C00345 10.0kb upstream 10.0kb upstream 10000 false A03: 1646896-1656895 Brassica rapa FPsc
Brara.C00345 10.0kb downstream 10.0kb downstream 11818 true A03: 1656896-1668713 Brassica rapa FPsc
Brara.C00345 10.0kb downstream 10.0kb downstream 10000 false A03: 1658714-1668713 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373010 5261 Brassicaceae View MSA
123834801 5264 Brassicales-Malvales View MSA
124339326 5266 SBM View MSA
124238959 5268 Malvidae View MSA
124074491 5270 Rosid View MSA
123746662 5271 Pentapetalae View MSA
122786657 5272 Eudicot View MSA
122047086 5273 Angiosperm View MSA
123429013 5275 Viridiplantae View MSA
121346648 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier