Gene : Brara.C00339 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.5.1.61 - Hydroxymethylbilane synthase / Uroporphyrinogen synthetase Genomic Order:  339
Name:  ? Brara.C00339 Secondary Identifier:  ? PAC:30618977
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5188 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5918 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00339 0.5kb upstream 0.5kb upstream 3026 true A03: 1639222-1642247 Brassica rapa FPsc
Brara.C00339 0.5kb upstream 0.5kb upstream 500 false A03: 1641748-1642247 Brassica rapa FPsc
Brara.C00339 0.5kb downstream 0.5kb downstream 3026 true A03: 1638722-1641747 Brassica rapa FPsc
Brara.C00339 0.5kb downstream 0.5kb downstream 500 false A03: 1638722-1639221 Brassica rapa FPsc
Brara.C00339 1.0kb upstream 1.0kb upstream 3526 true A03: 1639222-1642747 Brassica rapa FPsc
Brara.C00339 1.0kb upstream 1.0kb upstream 1000 false A03: 1641748-1642747 Brassica rapa FPsc
Brara.C00339 1.0kb downstream 1.0kb downstream 3526 true A03: 1638222-1641747 Brassica rapa FPsc
Brara.C00339 1.0kb downstream 1.0kb downstream 1000 false A03: 1638222-1639221 Brassica rapa FPsc
Brara.C00339 2.0kb upstream 2.0kb upstream 4526 true A03: 1639222-1643747 Brassica rapa FPsc
Brara.C00339 2.0kb upstream 2.0kb upstream 2000 false A03: 1641748-1643747 Brassica rapa FPsc
Brara.C00339 2.0kb downstream 2.0kb downstream 4526 true A03: 1637222-1641747 Brassica rapa FPsc
Brara.C00339 2.0kb downstream 2.0kb downstream 2000 false A03: 1637222-1639221 Brassica rapa FPsc
Brara.C00339 5.0kb upstream 5.0kb upstream 7526 true A03: 1639222-1646747 Brassica rapa FPsc
Brara.C00339 5.0kb upstream 5.0kb upstream 5000 false A03: 1641748-1646747 Brassica rapa FPsc
Brara.C00339 5.0kb downstream 5.0kb downstream 7526 true A03: 1634222-1641747 Brassica rapa FPsc
Brara.C00339 5.0kb downstream 5.0kb downstream 5000 false A03: 1634222-1639221 Brassica rapa FPsc
Brara.C00339 10.0kb upstream 10.0kb upstream 12526 true A03: 1639222-1651747 Brassica rapa FPsc
Brara.C00339 10.0kb upstream 10.0kb upstream 10000 false A03: 1641748-1651747 Brassica rapa FPsc
Brara.C00339 10.0kb downstream 10.0kb downstream 12526 true A03: 1629222-1641747 Brassica rapa FPsc
Brara.C00339 10.0kb downstream 10.0kb downstream 10000 false A03: 1629222-1639221 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347932 5261 Brassicaceae Singleton cluster - no MSA
123787364 5264 Brassicales-Malvales Singleton cluster - no MSA
124350121 5266 SBM View MSA
124253286 5268 Malvidae View MSA
124064477 5270 Rosid View MSA
123748249 5271 Pentapetalae View MSA
122787678 5272 Eudicot View MSA
122042710 5273 Angiosperm View MSA
121348830 5274 Embryophyte View MSA
123423964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier