Gene : Brara.C00379 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10992:SF742 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  379
Name:  ? Brara.C00379 Secondary Identifier:  ? PAC:30617623
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00379 0.5kb upstream 0.5kb upstream 1594 true A03: 1803279-1804872 Brassica rapa FPsc
Brara.C00379 0.5kb upstream 0.5kb upstream 500 false A03: 1803279-1803778 Brassica rapa FPsc
Brara.C00379 0.5kb downstream 0.5kb downstream 1594 true A03: 1803779-1805372 Brassica rapa FPsc
Brara.C00379 0.5kb downstream 0.5kb downstream 500 false A03: 1804873-1805372 Brassica rapa FPsc
Brara.C00379 1.0kb upstream 1.0kb upstream 2094 true A03: 1802779-1804872 Brassica rapa FPsc
Brara.C00379 1.0kb upstream 1.0kb upstream 1000 false A03: 1802779-1803778 Brassica rapa FPsc
Brara.C00379 1.0kb downstream 1.0kb downstream 2094 true A03: 1803779-1805872 Brassica rapa FPsc
Brara.C00379 1.0kb downstream 1.0kb downstream 1000 false A03: 1804873-1805872 Brassica rapa FPsc
Brara.C00379 2.0kb upstream 2.0kb upstream 3094 true A03: 1801779-1804872 Brassica rapa FPsc
Brara.C00379 2.0kb upstream 2.0kb upstream 2000 false A03: 1801779-1803778 Brassica rapa FPsc
Brara.C00379 2.0kb downstream 2.0kb downstream 3094 true A03: 1803779-1806872 Brassica rapa FPsc
Brara.C00379 2.0kb downstream 2.0kb downstream 2000 false A03: 1804873-1806872 Brassica rapa FPsc
Brara.C00379 5.0kb upstream 5.0kb upstream 6094 true A03: 1798779-1804872 Brassica rapa FPsc
Brara.C00379 5.0kb upstream 5.0kb upstream 5000 false A03: 1798779-1803778 Brassica rapa FPsc
Brara.C00379 5.0kb downstream 5.0kb downstream 6094 true A03: 1803779-1809872 Brassica rapa FPsc
Brara.C00379 5.0kb downstream 5.0kb downstream 5000 false A03: 1804873-1809872 Brassica rapa FPsc
Brara.C00379 10.0kb upstream 10.0kb upstream 11094 true A03: 1793779-1804872 Brassica rapa FPsc
Brara.C00379 10.0kb upstream 10.0kb upstream 10000 false A03: 1793779-1803778 Brassica rapa FPsc
Brara.C00379 10.0kb downstream 10.0kb downstream 11094 true A03: 1803779-1814872 Brassica rapa FPsc
Brara.C00379 10.0kb downstream 10.0kb downstream 10000 false A03: 1804873-1814872 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367543 5261 Brassicaceae View MSA
123834287 5264 Brassicales-Malvales View MSA
124336408 5266 SBM View MSA
124237638 5268 Malvidae View MSA
124063278 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier