Gene : Brara.C00371 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR15184:SF45 - ATP SYNTHASE SUBUNIT BETA-1, MITOCHONDRIAL-RELATED Genomic Order:  371
Name:  ? Brara.C00371 Secondary Identifier:  ? PAC:30619191
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6126 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7219 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7229 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-841 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00371 0.5kb upstream 0.5kb upstream 3288 true A03: 1766780-1770067 Brassica rapa FPsc
Brara.C00371 0.5kb upstream 0.5kb upstream 500 false A03: 1769568-1770067 Brassica rapa FPsc
Brara.C00371 0.5kb downstream 0.5kb downstream 3288 true A03: 1766280-1769567 Brassica rapa FPsc
Brara.C00371 0.5kb downstream 0.5kb downstream 500 false A03: 1766280-1766779 Brassica rapa FPsc
Brara.C00371 1.0kb upstream 1.0kb upstream 3788 true A03: 1766780-1770567 Brassica rapa FPsc
Brara.C00371 1.0kb upstream 1.0kb upstream 1000 false A03: 1769568-1770567 Brassica rapa FPsc
Brara.C00371 1.0kb downstream 1.0kb downstream 3788 true A03: 1765780-1769567 Brassica rapa FPsc
Brara.C00371 1.0kb downstream 1.0kb downstream 1000 false A03: 1765780-1766779 Brassica rapa FPsc
Brara.C00371 2.0kb upstream 2.0kb upstream 4788 true A03: 1766780-1771567 Brassica rapa FPsc
Brara.C00371 2.0kb upstream 2.0kb upstream 2000 false A03: 1769568-1771567 Brassica rapa FPsc
Brara.C00371 2.0kb downstream 2.0kb downstream 4788 true A03: 1764780-1769567 Brassica rapa FPsc
Brara.C00371 2.0kb downstream 2.0kb downstream 2000 false A03: 1764780-1766779 Brassica rapa FPsc
Brara.C00371 5.0kb upstream 5.0kb upstream 7788 true A03: 1766780-1774567 Brassica rapa FPsc
Brara.C00371 5.0kb upstream 5.0kb upstream 5000 false A03: 1769568-1774567 Brassica rapa FPsc
Brara.C00371 5.0kb downstream 5.0kb downstream 7788 true A03: 1761780-1769567 Brassica rapa FPsc
Brara.C00371 5.0kb downstream 5.0kb downstream 5000 false A03: 1761780-1766779 Brassica rapa FPsc
Brara.C00371 10.0kb upstream 10.0kb upstream 12788 true A03: 1766780-1779567 Brassica rapa FPsc
Brara.C00371 10.0kb upstream 10.0kb upstream 10000 false A03: 1769568-1779567 Brassica rapa FPsc
Brara.C00371 10.0kb downstream 10.0kb downstream 12788 true A03: 1756780-1769567 Brassica rapa FPsc
Brara.C00371 10.0kb downstream 10.0kb downstream 10000 false A03: 1756780-1766779 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365207 5261 Brassicaceae View MSA
123831006 5264 Brassicales-Malvales View MSA
124350602 5266 SBM View MSA
124250549 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier