Gene : Brara.C00396 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  396
Name:  ? Brara.C00396 Secondary Identifier:  ? PAC:30618006
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1001 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00396 0.5kb upstream 0.5kb upstream 6350 true A03: 1864267-1870616 Brassica rapa FPsc
Brara.C00396 0.5kb upstream 0.5kb upstream 500 false A03: 1864267-1864766 Brassica rapa FPsc
Brara.C00396 0.5kb downstream 0.5kb downstream 6350 true A03: 1864767-1871116 Brassica rapa FPsc
Brara.C00396 0.5kb downstream 0.5kb downstream 500 false A03: 1870617-1871116 Brassica rapa FPsc
Brara.C00396 1.0kb upstream 1.0kb upstream 6850 true A03: 1863767-1870616 Brassica rapa FPsc
Brara.C00396 1.0kb upstream 1.0kb upstream 1000 false A03: 1863767-1864766 Brassica rapa FPsc
Brara.C00396 1.0kb downstream 1.0kb downstream 6850 true A03: 1864767-1871616 Brassica rapa FPsc
Brara.C00396 1.0kb downstream 1.0kb downstream 1000 false A03: 1870617-1871616 Brassica rapa FPsc
Brara.C00396 2.0kb upstream 2.0kb upstream 7850 true A03: 1862767-1870616 Brassica rapa FPsc
Brara.C00396 2.0kb upstream 2.0kb upstream 2000 false A03: 1862767-1864766 Brassica rapa FPsc
Brara.C00396 2.0kb downstream 2.0kb downstream 7850 true A03: 1864767-1872616 Brassica rapa FPsc
Brara.C00396 2.0kb downstream 2.0kb downstream 2000 false A03: 1870617-1872616 Brassica rapa FPsc
Brara.C00396 5.0kb upstream 5.0kb upstream 10850 true A03: 1859767-1870616 Brassica rapa FPsc
Brara.C00396 5.0kb upstream 5.0kb upstream 5000 false A03: 1859767-1864766 Brassica rapa FPsc
Brara.C00396 5.0kb downstream 5.0kb downstream 10850 true A03: 1864767-1875616 Brassica rapa FPsc
Brara.C00396 5.0kb downstream 5.0kb downstream 5000 false A03: 1870617-1875616 Brassica rapa FPsc
Brara.C00396 10.0kb upstream 10.0kb upstream 15850 true A03: 1854767-1870616 Brassica rapa FPsc
Brara.C00396 10.0kb upstream 10.0kb upstream 10000 false A03: 1854767-1864766 Brassica rapa FPsc
Brara.C00396 10.0kb downstream 10.0kb downstream 15850 true A03: 1864767-1880616 Brassica rapa FPsc
Brara.C00396 10.0kb downstream 10.0kb downstream 10000 false A03: 1870617-1880616 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373968 5261 Brassicaceae View MSA
123800654 5264 Brassicales-Malvales View MSA
124298044 5266 SBM View MSA
124149784 5268 Malvidae View MSA
123875523 5270 Rosid View MSA
123746162 5271 Pentapetalae View MSA
122771799 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier