Gene : Brara.E01926 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED Genomic Order:  1926
Name:  ? Brara.E01926 Secondary Identifier:  ? PAC:30624714
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01926 0.5kb upstream 0.5kb upstream 2259 true A05: 16832700-16834958 Brassica rapa FPsc
Brara.E01926 0.5kb upstream 0.5kb upstream 500 false A05: 16832700-16833199 Brassica rapa FPsc
Brara.E01926 0.5kb downstream 0.5kb downstream 2259 true A05: 16833200-16835458 Brassica rapa FPsc
Brara.E01926 0.5kb downstream 0.5kb downstream 500 false A05: 16834959-16835458 Brassica rapa FPsc
Brara.E01926 1.0kb upstream 1.0kb upstream 2759 true A05: 16832200-16834958 Brassica rapa FPsc
Brara.E01926 1.0kb upstream 1.0kb upstream 1000 false A05: 16832200-16833199 Brassica rapa FPsc
Brara.E01926 1.0kb downstream 1.0kb downstream 2759 true A05: 16833200-16835958 Brassica rapa FPsc
Brara.E01926 1.0kb downstream 1.0kb downstream 1000 false A05: 16834959-16835958 Brassica rapa FPsc
Brara.E01926 2.0kb upstream 2.0kb upstream 3759 true A05: 16831200-16834958 Brassica rapa FPsc
Brara.E01926 2.0kb upstream 2.0kb upstream 2000 false A05: 16831200-16833199 Brassica rapa FPsc
Brara.E01926 2.0kb downstream 2.0kb downstream 3759 true A05: 16833200-16836958 Brassica rapa FPsc
Brara.E01926 2.0kb downstream 2.0kb downstream 2000 false A05: 16834959-16836958 Brassica rapa FPsc
Brara.E01926 5.0kb upstream 5.0kb upstream 6759 true A05: 16828200-16834958 Brassica rapa FPsc
Brara.E01926 5.0kb upstream 5.0kb upstream 5000 false A05: 16828200-16833199 Brassica rapa FPsc
Brara.E01926 5.0kb downstream 5.0kb downstream 6759 true A05: 16833200-16839958 Brassica rapa FPsc
Brara.E01926 5.0kb downstream 5.0kb downstream 5000 false A05: 16834959-16839958 Brassica rapa FPsc
Brara.E01926 10.0kb upstream 10.0kb upstream 11759 true A05: 16823200-16834958 Brassica rapa FPsc
Brara.E01926 10.0kb upstream 10.0kb upstream 10000 false A05: 16823200-16833199 Brassica rapa FPsc
Brara.E01926 10.0kb downstream 10.0kb downstream 11759 true A05: 16833200-16844958 Brassica rapa FPsc
Brara.E01926 10.0kb downstream 10.0kb downstream 10000 false A05: 16834959-16844958 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349422 5261 Brassicaceae Singleton cluster - no MSA
123788612 5264 Brassicales-Malvales Singleton cluster - no MSA
124286635 5266 SBM Singleton cluster - no MSA
124140465 5268 Malvidae Singleton cluster - no MSA
124073706 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier