Gene : Brara.E01835 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  1835
Name:  ? Brara.E01835 Secondary Identifier:  ? PAC:30624727
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01835 0.5kb upstream 0.5kb upstream 2283 true A05: 14810172-14812454 Brassica rapa FPsc
Brara.E01835 0.5kb upstream 0.5kb upstream 500 false A05: 14810172-14810671 Brassica rapa FPsc
Brara.E01835 0.5kb downstream 0.5kb downstream 2283 true A05: 14810672-14812954 Brassica rapa FPsc
Brara.E01835 0.5kb downstream 0.5kb downstream 500 false A05: 14812455-14812954 Brassica rapa FPsc
Brara.E01835 1.0kb upstream 1.0kb upstream 2783 true A05: 14809672-14812454 Brassica rapa FPsc
Brara.E01835 1.0kb upstream 1.0kb upstream 1000 false A05: 14809672-14810671 Brassica rapa FPsc
Brara.E01835 1.0kb downstream 1.0kb downstream 2783 true A05: 14810672-14813454 Brassica rapa FPsc
Brara.E01835 1.0kb downstream 1.0kb downstream 1000 false A05: 14812455-14813454 Brassica rapa FPsc
Brara.E01835 2.0kb upstream 2.0kb upstream 3783 true A05: 14808672-14812454 Brassica rapa FPsc
Brara.E01835 2.0kb upstream 2.0kb upstream 2000 false A05: 14808672-14810671 Brassica rapa FPsc
Brara.E01835 2.0kb downstream 2.0kb downstream 3783 true A05: 14810672-14814454 Brassica rapa FPsc
Brara.E01835 2.0kb downstream 2.0kb downstream 2000 false A05: 14812455-14814454 Brassica rapa FPsc
Brara.E01835 5.0kb upstream 5.0kb upstream 6783 true A05: 14805672-14812454 Brassica rapa FPsc
Brara.E01835 5.0kb upstream 5.0kb upstream 5000 false A05: 14805672-14810671 Brassica rapa FPsc
Brara.E01835 5.0kb downstream 5.0kb downstream 6783 true A05: 14810672-14817454 Brassica rapa FPsc
Brara.E01835 5.0kb downstream 5.0kb downstream 5000 false A05: 14812455-14817454 Brassica rapa FPsc
Brara.E01835 10.0kb upstream 10.0kb upstream 11783 true A05: 14800672-14812454 Brassica rapa FPsc
Brara.E01835 10.0kb upstream 10.0kb upstream 10000 false A05: 14800672-14810671 Brassica rapa FPsc
Brara.E01835 10.0kb downstream 10.0kb downstream 11783 true A05: 14810672-14822454 Brassica rapa FPsc
Brara.E01835 10.0kb downstream 10.0kb downstream 10000 false A05: 14812455-14822454 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374702 5261 Brassicaceae View MSA
123830494 5264 Brassicales-Malvales View MSA
124342316 5266 SBM View MSA
124238632 5268 Malvidae View MSA
124067838 5270 Rosid View MSA
123737678 5271 Pentapetalae View MSA
122786109 5272 Eudicot View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier