Gene : Brara.C00224 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR31412:SF5 - ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  224
Name:  ? Brara.C00224 Secondary Identifier:  ? PAC:30616012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00224 0.5kb upstream 0.5kb upstream 3518 true A03: 1080055-1083572 Brassica rapa FPsc
Brara.C00224 0.5kb upstream 0.5kb upstream 500 false A03: 1083073-1083572 Brassica rapa FPsc
Brara.C00224 0.5kb downstream 0.5kb downstream 3518 true A03: 1079555-1083072 Brassica rapa FPsc
Brara.C00224 0.5kb downstream 0.5kb downstream 500 false A03: 1079555-1080054 Brassica rapa FPsc
Brara.C00224 1.0kb upstream 1.0kb upstream 4018 true A03: 1080055-1084072 Brassica rapa FPsc
Brara.C00224 1.0kb upstream 1.0kb upstream 1000 false A03: 1083073-1084072 Brassica rapa FPsc
Brara.C00224 1.0kb downstream 1.0kb downstream 4018 true A03: 1079055-1083072 Brassica rapa FPsc
Brara.C00224 1.0kb downstream 1.0kb downstream 1000 false A03: 1079055-1080054 Brassica rapa FPsc
Brara.C00224 2.0kb upstream 2.0kb upstream 5018 true A03: 1080055-1085072 Brassica rapa FPsc
Brara.C00224 2.0kb upstream 2.0kb upstream 2000 false A03: 1083073-1085072 Brassica rapa FPsc
Brara.C00224 2.0kb downstream 2.0kb downstream 5018 true A03: 1078055-1083072 Brassica rapa FPsc
Brara.C00224 2.0kb downstream 2.0kb downstream 2000 false A03: 1078055-1080054 Brassica rapa FPsc
Brara.C00224 5.0kb upstream 5.0kb upstream 8018 true A03: 1080055-1088072 Brassica rapa FPsc
Brara.C00224 5.0kb upstream 5.0kb upstream 5000 false A03: 1083073-1088072 Brassica rapa FPsc
Brara.C00224 5.0kb downstream 5.0kb downstream 8018 true A03: 1075055-1083072 Brassica rapa FPsc
Brara.C00224 5.0kb downstream 5.0kb downstream 5000 false A03: 1075055-1080054 Brassica rapa FPsc
Brara.C00224 10.0kb upstream 10.0kb upstream 13018 true A03: 1080055-1093072 Brassica rapa FPsc
Brara.C00224 10.0kb upstream 10.0kb upstream 10000 false A03: 1083073-1093072 Brassica rapa FPsc
Brara.C00224 10.0kb downstream 10.0kb downstream 13018 true A03: 1070055-1083072 Brassica rapa FPsc
Brara.C00224 10.0kb downstream 10.0kb downstream 10000 false A03: 1070055-1080054 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373446 5261 Brassicaceae View MSA
123834599 5264 Brassicales-Malvales View MSA
124341075 5266 SBM View MSA
124242686 5268 Malvidae View MSA
124061333 5270 Rosid View MSA
123739814 5271 Pentapetalae View MSA
122788407 5272 Eudicot View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier