Gene : Brara.I04546 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23315//PTHR23315:SF117 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Genomic Order:  4546
Name:  ? Brara.I04546 Secondary Identifier:  ? PAC:30643340
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04546 0.5kb upstream 0.5kb upstream 3651 true A09: 39278365-39282015 Brassica rapa FPsc
Brara.I04546 0.5kb upstream 0.5kb upstream 500 false A09: 39278365-39278864 Brassica rapa FPsc
Brara.I04546 0.5kb downstream 0.5kb downstream 3651 true A09: 39278865-39282515 Brassica rapa FPsc
Brara.I04546 0.5kb downstream 0.5kb downstream 500 false A09: 39282016-39282515 Brassica rapa FPsc
Brara.I04546 1.0kb upstream 1.0kb upstream 4151 true A09: 39277865-39282015 Brassica rapa FPsc
Brara.I04546 1.0kb upstream 1.0kb upstream 1000 false A09: 39277865-39278864 Brassica rapa FPsc
Brara.I04546 1.0kb downstream 1.0kb downstream 4151 true A09: 39278865-39283015 Brassica rapa FPsc
Brara.I04546 1.0kb downstream 1.0kb downstream 1000 false A09: 39282016-39283015 Brassica rapa FPsc
Brara.I04546 2.0kb upstream 2.0kb upstream 5151 true A09: 39276865-39282015 Brassica rapa FPsc
Brara.I04546 2.0kb upstream 2.0kb upstream 2000 false A09: 39276865-39278864 Brassica rapa FPsc
Brara.I04546 2.0kb downstream 2.0kb downstream 5151 true A09: 39278865-39284015 Brassica rapa FPsc
Brara.I04546 2.0kb downstream 2.0kb downstream 2000 false A09: 39282016-39284015 Brassica rapa FPsc
Brara.I04546 5.0kb upstream 5.0kb upstream 8151 true A09: 39273865-39282015 Brassica rapa FPsc
Brara.I04546 5.0kb upstream 5.0kb upstream 5000 false A09: 39273865-39278864 Brassica rapa FPsc
Brara.I04546 5.0kb downstream 5.0kb downstream 8151 true A09: 39278865-39287015 Brassica rapa FPsc
Brara.I04546 5.0kb downstream 5.0kb downstream 5000 false A09: 39282016-39287015 Brassica rapa FPsc
Brara.I04546 10.0kb upstream 10.0kb upstream 13151 true A09: 39268865-39282015 Brassica rapa FPsc
Brara.I04546 10.0kb upstream 10.0kb upstream 10000 false A09: 39268865-39278864 Brassica rapa FPsc
Brara.I04546 10.0kb downstream 10.0kb downstream 13151 true A09: 39278865-39292015 Brassica rapa FPsc
Brara.I04546 10.0kb downstream 10.0kb downstream 10000 false A09: 39282016-39292015 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375888 5261 Brassicaceae View MSA
123840639 5264 Brassicales-Malvales View MSA
124346510 5266 SBM View MSA
124239775 5268 Malvidae View MSA
124065009 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier