Gene : Brara.C00280 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10555//PTHR10555:SF155 - SORTING NEXIN Genomic Order:  280
Name:  ? Brara.C00280 Secondary Identifier:  ? PAC:30619983
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00280 0.5kb upstream 0.5kb upstream 2723 true A03: 1335067-1337789 Brassica rapa FPsc
Brara.C00280 0.5kb upstream 0.5kb upstream 500 false A03: 1337290-1337789 Brassica rapa FPsc
Brara.C00280 0.5kb downstream 0.5kb downstream 2723 true A03: 1334567-1337289 Brassica rapa FPsc
Brara.C00280 0.5kb downstream 0.5kb downstream 500 false A03: 1334567-1335066 Brassica rapa FPsc
Brara.C00280 1.0kb upstream 1.0kb upstream 3223 true A03: 1335067-1338289 Brassica rapa FPsc
Brara.C00280 1.0kb upstream 1.0kb upstream 1000 false A03: 1337290-1338289 Brassica rapa FPsc
Brara.C00280 1.0kb downstream 1.0kb downstream 3223 true A03: 1334067-1337289 Brassica rapa FPsc
Brara.C00280 1.0kb downstream 1.0kb downstream 1000 false A03: 1334067-1335066 Brassica rapa FPsc
Brara.C00280 2.0kb upstream 2.0kb upstream 4223 true A03: 1335067-1339289 Brassica rapa FPsc
Brara.C00280 2.0kb upstream 2.0kb upstream 2000 false A03: 1337290-1339289 Brassica rapa FPsc
Brara.C00280 2.0kb downstream 2.0kb downstream 4223 true A03: 1333067-1337289 Brassica rapa FPsc
Brara.C00280 2.0kb downstream 2.0kb downstream 2000 false A03: 1333067-1335066 Brassica rapa FPsc
Brara.C00280 5.0kb upstream 5.0kb upstream 7223 true A03: 1335067-1342289 Brassica rapa FPsc
Brara.C00280 5.0kb upstream 5.0kb upstream 5000 false A03: 1337290-1342289 Brassica rapa FPsc
Brara.C00280 5.0kb downstream 5.0kb downstream 7223 true A03: 1330067-1337289 Brassica rapa FPsc
Brara.C00280 5.0kb downstream 5.0kb downstream 5000 false A03: 1330067-1335066 Brassica rapa FPsc
Brara.C00280 10.0kb upstream 10.0kb upstream 12223 true A03: 1335067-1347289 Brassica rapa FPsc
Brara.C00280 10.0kb upstream 10.0kb upstream 10000 false A03: 1337290-1347289 Brassica rapa FPsc
Brara.C00280 10.0kb downstream 10.0kb downstream 12223 true A03: 1325067-1337289 Brassica rapa FPsc
Brara.C00280 10.0kb downstream 10.0kb downstream 10000 false A03: 1325067-1335066 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
122348223 5261 Brassicaceae Singleton cluster - no MSA
123787604 5264 Brassicales-Malvales Singleton cluster - no MSA
124285670 5266 SBM Singleton cluster - no MSA
124139664 5268 Malvidae Singleton cluster - no MSA
123867010 5270 Rosid Singleton cluster - no MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier