Gene : Brara.C00292 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR31321:SF23 - PECTINESTERASE PPME1-RELATED Genomic Order:  292
Name:  ? Brara.C00292 Secondary Identifier:  ? PAC:30616281
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00292 0.5kb upstream 0.5kb upstream 2387 true A03: 1408251-1410637 Brassica rapa FPsc
Brara.C00292 0.5kb upstream 0.5kb upstream 500 false A03: 1408251-1408750 Brassica rapa FPsc
Brara.C00292 0.5kb downstream 0.5kb downstream 2387 true A03: 1408751-1411137 Brassica rapa FPsc
Brara.C00292 0.5kb downstream 0.5kb downstream 500 false A03: 1410638-1411137 Brassica rapa FPsc
Brara.C00292 1.0kb upstream 1.0kb upstream 2887 true A03: 1407751-1410637 Brassica rapa FPsc
Brara.C00292 1.0kb upstream 1.0kb upstream 1000 false A03: 1407751-1408750 Brassica rapa FPsc
Brara.C00292 1.0kb downstream 1.0kb downstream 2887 true A03: 1408751-1411637 Brassica rapa FPsc
Brara.C00292 1.0kb downstream 1.0kb downstream 1000 false A03: 1410638-1411637 Brassica rapa FPsc
Brara.C00292 2.0kb upstream 2.0kb upstream 3887 true A03: 1406751-1410637 Brassica rapa FPsc
Brara.C00292 2.0kb upstream 2.0kb upstream 2000 false A03: 1406751-1408750 Brassica rapa FPsc
Brara.C00292 2.0kb downstream 2.0kb downstream 3887 true A03: 1408751-1412637 Brassica rapa FPsc
Brara.C00292 2.0kb downstream 2.0kb downstream 2000 false A03: 1410638-1412637 Brassica rapa FPsc
Brara.C00292 5.0kb upstream 5.0kb upstream 6887 true A03: 1403751-1410637 Brassica rapa FPsc
Brara.C00292 5.0kb upstream 5.0kb upstream 5000 false A03: 1403751-1408750 Brassica rapa FPsc
Brara.C00292 5.0kb downstream 5.0kb downstream 6887 true A03: 1408751-1415637 Brassica rapa FPsc
Brara.C00292 5.0kb downstream 5.0kb downstream 5000 false A03: 1410638-1415637 Brassica rapa FPsc
Brara.C00292 10.0kb upstream 10.0kb upstream 11887 true A03: 1398751-1410637 Brassica rapa FPsc
Brara.C00292 10.0kb upstream 10.0kb upstream 10000 false A03: 1398751-1408750 Brassica rapa FPsc
Brara.C00292 10.0kb downstream 10.0kb downstream 11887 true A03: 1408751-1420637 Brassica rapa FPsc
Brara.C00292 10.0kb downstream 10.0kb downstream 10000 false A03: 1410638-1420637 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372644 5261 Brassicaceae View MSA
123800403 5264 Brassicales-Malvales View MSA
124297818 5266 SBM View MSA
124253324 5268 Malvidae View MSA
124071696 5270 Rosid View MSA
123740013 5271 Pentapetalae View MSA
122792940 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier