Gene : Brara.J00433 B. rapa FPsc v1.3
Defline:  (1 of 1) KOG0230 - Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins Genomic Order:  433
Name:  ? Brara.J00433 Secondary Identifier:  ? PAC:30613472
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00433 0.5kb upstream 0.5kb upstream 3253 true A10: 2613757-2617009 Brassica rapa FPsc
Brara.J00433 0.5kb upstream 0.5kb upstream 500 false A10: 2613757-2614256 Brassica rapa FPsc
Brara.J00433 0.5kb downstream 0.5kb downstream 3253 true A10: 2614257-2617509 Brassica rapa FPsc
Brara.J00433 0.5kb downstream 0.5kb downstream 500 false A10: 2617010-2617509 Brassica rapa FPsc
Brara.J00433 1.0kb upstream 1.0kb upstream 3753 true A10: 2613257-2617009 Brassica rapa FPsc
Brara.J00433 1.0kb upstream 1.0kb upstream 1000 false A10: 2613257-2614256 Brassica rapa FPsc
Brara.J00433 1.0kb downstream 1.0kb downstream 3753 true A10: 2614257-2618009 Brassica rapa FPsc
Brara.J00433 1.0kb downstream 1.0kb downstream 1000 false A10: 2617010-2618009 Brassica rapa FPsc
Brara.J00433 2.0kb upstream 2.0kb upstream 4753 true A10: 2612257-2617009 Brassica rapa FPsc
Brara.J00433 2.0kb upstream 2.0kb upstream 2000 false A10: 2612257-2614256 Brassica rapa FPsc
Brara.J00433 2.0kb downstream 2.0kb downstream 4753 true A10: 2614257-2619009 Brassica rapa FPsc
Brara.J00433 2.0kb downstream 2.0kb downstream 2000 false A10: 2617010-2619009 Brassica rapa FPsc
Brara.J00433 5.0kb upstream 5.0kb upstream 7753 true A10: 2609257-2617009 Brassica rapa FPsc
Brara.J00433 5.0kb upstream 5.0kb upstream 5000 false A10: 2609257-2614256 Brassica rapa FPsc
Brara.J00433 5.0kb downstream 5.0kb downstream 7753 true A10: 2614257-2622009 Brassica rapa FPsc
Brara.J00433 5.0kb downstream 5.0kb downstream 5000 false A10: 2617010-2622009 Brassica rapa FPsc
Brara.J00433 10.0kb upstream 10.0kb upstream 12753 true A10: 2604257-2617009 Brassica rapa FPsc
Brara.J00433 10.0kb upstream 10.0kb upstream 10000 false A10: 2604257-2614256 Brassica rapa FPsc
Brara.J00433 10.0kb downstream 10.0kb downstream 12753 true A10: 2614257-2627009 Brassica rapa FPsc
Brara.J00433 10.0kb downstream 10.0kb downstream 10000 false A10: 2617010-2627009 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027535 5273 Angiosperm View MSA
122346397 5261 Brassicaceae Singleton cluster - no MSA
123786088 5264 Brassicales-Malvales Singleton cluster - no MSA
124284209 5266 SBM Singleton cluster - no MSA
124138472 5268 Malvidae Singleton cluster - no MSA
123866023 5270 Rosid Singleton cluster - no MSA
123451111 5271 Pentapetalae Singleton cluster - no MSA
122486623 5272 Eudicot Singleton cluster - no MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier