Gene : Brara.J00434 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10909:SF11 - ACYL-COENZYME A OXIDASE-LIKE PROTEIN Genomic Order:  434
Name:  ? Brara.J00434 Secondary Identifier:  ? PAC:30612840
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6837 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00434 0.5kb upstream 0.5kb upstream 4119 true A10: 2637776-2641894 Brassica rapa FPsc
Brara.J00434 0.5kb upstream 0.5kb upstream 500 false A10: 2637776-2638275 Brassica rapa FPsc
Brara.J00434 0.5kb downstream 0.5kb downstream 4119 true A10: 2638276-2642394 Brassica rapa FPsc
Brara.J00434 0.5kb downstream 0.5kb downstream 500 false A10: 2641895-2642394 Brassica rapa FPsc
Brara.J00434 1.0kb upstream 1.0kb upstream 4619 true A10: 2637276-2641894 Brassica rapa FPsc
Brara.J00434 1.0kb upstream 1.0kb upstream 1000 false A10: 2637276-2638275 Brassica rapa FPsc
Brara.J00434 1.0kb downstream 1.0kb downstream 4619 true A10: 2638276-2642894 Brassica rapa FPsc
Brara.J00434 1.0kb downstream 1.0kb downstream 1000 false A10: 2641895-2642894 Brassica rapa FPsc
Brara.J00434 2.0kb upstream 2.0kb upstream 5619 true A10: 2636276-2641894 Brassica rapa FPsc
Brara.J00434 2.0kb upstream 2.0kb upstream 2000 false A10: 2636276-2638275 Brassica rapa FPsc
Brara.J00434 2.0kb downstream 2.0kb downstream 5619 true A10: 2638276-2643894 Brassica rapa FPsc
Brara.J00434 2.0kb downstream 2.0kb downstream 2000 false A10: 2641895-2643894 Brassica rapa FPsc
Brara.J00434 5.0kb upstream 5.0kb upstream 8619 true A10: 2633276-2641894 Brassica rapa FPsc
Brara.J00434 5.0kb upstream 5.0kb upstream 5000 false A10: 2633276-2638275 Brassica rapa FPsc
Brara.J00434 5.0kb downstream 5.0kb downstream 8619 true A10: 2638276-2646894 Brassica rapa FPsc
Brara.J00434 5.0kb downstream 5.0kb downstream 5000 false A10: 2641895-2646894 Brassica rapa FPsc
Brara.J00434 10.0kb upstream 10.0kb upstream 13619 true A10: 2628276-2641894 Brassica rapa FPsc
Brara.J00434 10.0kb upstream 10.0kb upstream 10000 false A10: 2628276-2638275 Brassica rapa FPsc
Brara.J00434 10.0kb downstream 10.0kb downstream 13619 true A10: 2638276-2651894 Brassica rapa FPsc
Brara.J00434 10.0kb downstream 10.0kb downstream 10000 false A10: 2641895-2651894 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370734 5261 Brassicaceae View MSA
123835956 5264 Brassicales-Malvales View MSA
124340146 5266 SBM View MSA
124237991 5268 Malvidae View MSA
124066099 5270 Rosid View MSA
123753780 5271 Pentapetalae View MSA
122787775 5272 Eudicot View MSA
122044984 5273 Angiosperm View MSA
121345610 5274 Embryophyte View MSA
123428252 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier