Gene : Brara.J00441 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23076//PTHR23076:SF60 - METALLOPROTEASE M41 FTSH Genomic Order:  441
Name:  ? Brara.J00441 Secondary Identifier:  ? PAC:30611754
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00441 0.5kb upstream 0.5kb upstream 3143 true A10: 2682586-2685728 Brassica rapa FPsc
Brara.J00441 0.5kb upstream 0.5kb upstream 500 false A10: 2685229-2685728 Brassica rapa FPsc
Brara.J00441 0.5kb downstream 0.5kb downstream 3143 true A10: 2682086-2685228 Brassica rapa FPsc
Brara.J00441 0.5kb downstream 0.5kb downstream 500 false A10: 2682086-2682585 Brassica rapa FPsc
Brara.J00441 1.0kb upstream 1.0kb upstream 3643 true A10: 2682586-2686228 Brassica rapa FPsc
Brara.J00441 1.0kb upstream 1.0kb upstream 1000 false A10: 2685229-2686228 Brassica rapa FPsc
Brara.J00441 1.0kb downstream 1.0kb downstream 3643 true A10: 2681586-2685228 Brassica rapa FPsc
Brara.J00441 1.0kb downstream 1.0kb downstream 1000 false A10: 2681586-2682585 Brassica rapa FPsc
Brara.J00441 2.0kb upstream 2.0kb upstream 4643 true A10: 2682586-2687228 Brassica rapa FPsc
Brara.J00441 2.0kb upstream 2.0kb upstream 2000 false A10: 2685229-2687228 Brassica rapa FPsc
Brara.J00441 2.0kb downstream 2.0kb downstream 4643 true A10: 2680586-2685228 Brassica rapa FPsc
Brara.J00441 2.0kb downstream 2.0kb downstream 2000 false A10: 2680586-2682585 Brassica rapa FPsc
Brara.J00441 5.0kb upstream 5.0kb upstream 7643 true A10: 2682586-2690228 Brassica rapa FPsc
Brara.J00441 5.0kb upstream 5.0kb upstream 5000 false A10: 2685229-2690228 Brassica rapa FPsc
Brara.J00441 5.0kb downstream 5.0kb downstream 7643 true A10: 2677586-2685228 Brassica rapa FPsc
Brara.J00441 5.0kb downstream 5.0kb downstream 5000 false A10: 2677586-2682585 Brassica rapa FPsc
Brara.J00441 10.0kb upstream 10.0kb upstream 12643 true A10: 2682586-2695228 Brassica rapa FPsc
Brara.J00441 10.0kb upstream 10.0kb upstream 10000 false A10: 2685229-2695228 Brassica rapa FPsc
Brara.J00441 10.0kb downstream 10.0kb downstream 12643 true A10: 2672586-2685228 Brassica rapa FPsc
Brara.J00441 10.0kb downstream 10.0kb downstream 10000 false A10: 2672586-2682585 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362450 5261 Brassicaceae View MSA
123839956 5264 Brassicales-Malvales View MSA
124341395 5266 SBM View MSA
124239029 5268 Malvidae View MSA
124067047 5270 Rosid View MSA
123736542 5271 Pentapetalae View MSA
122790199 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier