Gene : Brara.C01117 B. rapa FPsc v1.3
Defline:  (1 of 5) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) Genomic Order:  1117
Name:  ? Brara.C01117 Secondary Identifier:  ? PAC:30618781
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01117 0.5kb upstream 0.5kb upstream 3513 true A03: 5233147-5236659 Brassica rapa FPsc
Brara.C01117 0.5kb upstream 0.5kb upstream 500 false A03: 5233147-5233646 Brassica rapa FPsc
Brara.C01117 0.5kb downstream 0.5kb downstream 3513 true A03: 5233647-5237159 Brassica rapa FPsc
Brara.C01117 0.5kb downstream 0.5kb downstream 500 false A03: 5236660-5237159 Brassica rapa FPsc
Brara.C01117 1.0kb upstream 1.0kb upstream 4013 true A03: 5232647-5236659 Brassica rapa FPsc
Brara.C01117 1.0kb upstream 1.0kb upstream 1000 false A03: 5232647-5233646 Brassica rapa FPsc
Brara.C01117 1.0kb downstream 1.0kb downstream 4013 true A03: 5233647-5237659 Brassica rapa FPsc
Brara.C01117 1.0kb downstream 1.0kb downstream 1000 false A03: 5236660-5237659 Brassica rapa FPsc
Brara.C01117 2.0kb upstream 2.0kb upstream 5013 true A03: 5231647-5236659 Brassica rapa FPsc
Brara.C01117 2.0kb upstream 2.0kb upstream 2000 false A03: 5231647-5233646 Brassica rapa FPsc
Brara.C01117 2.0kb downstream 2.0kb downstream 5013 true A03: 5233647-5238659 Brassica rapa FPsc
Brara.C01117 2.0kb downstream 2.0kb downstream 2000 false A03: 5236660-5238659 Brassica rapa FPsc
Brara.C01117 5.0kb upstream 5.0kb upstream 8013 true A03: 5228647-5236659 Brassica rapa FPsc
Brara.C01117 5.0kb upstream 5.0kb upstream 5000 false A03: 5228647-5233646 Brassica rapa FPsc
Brara.C01117 5.0kb downstream 5.0kb downstream 8013 true A03: 5233647-5241659 Brassica rapa FPsc
Brara.C01117 5.0kb downstream 5.0kb downstream 5000 false A03: 5236660-5241659 Brassica rapa FPsc
Brara.C01117 10.0kb upstream 10.0kb upstream 13013 true A03: 5223647-5236659 Brassica rapa FPsc
Brara.C01117 10.0kb upstream 10.0kb upstream 10000 false A03: 5223647-5233646 Brassica rapa FPsc
Brara.C01117 10.0kb downstream 10.0kb downstream 13013 true A03: 5233647-5246659 Brassica rapa FPsc
Brara.C01117 10.0kb downstream 10.0kb downstream 10000 false A03: 5236660-5246659 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347881 5261 Brassicaceae Singleton cluster - no MSA
123840824 5264 Brassicales-Malvales View MSA
124336409 5266 SBM View MSA
124239058 5268 Malvidae View MSA
124073935 5270 Rosid View MSA
123747200 5271 Pentapetalae View MSA
122786859 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier