Gene : Brara.J00174 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13829 - SNRNP CORE PROTEIN FAMILY MEMBER Genomic Order:  174
Name:  ? Brara.J00174 Secondary Identifier:  ? PAC:30611851
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00174 0.5kb upstream 0.5kb upstream 1873 true A10: 938426-940298 Brassica rapa FPsc
Brara.J00174 0.5kb upstream 0.5kb upstream 500 false A10: 939799-940298 Brassica rapa FPsc
Brara.J00174 0.5kb downstream 0.5kb downstream 1873 true A10: 937926-939798 Brassica rapa FPsc
Brara.J00174 0.5kb downstream 0.5kb downstream 500 false A10: 937926-938425 Brassica rapa FPsc
Brara.J00174 1.0kb upstream 1.0kb upstream 2373 true A10: 938426-940798 Brassica rapa FPsc
Brara.J00174 1.0kb upstream 1.0kb upstream 1000 false A10: 939799-940798 Brassica rapa FPsc
Brara.J00174 1.0kb downstream 1.0kb downstream 2373 true A10: 937426-939798 Brassica rapa FPsc
Brara.J00174 1.0kb downstream 1.0kb downstream 1000 false A10: 937426-938425 Brassica rapa FPsc
Brara.J00174 2.0kb upstream 2.0kb upstream 3373 true A10: 938426-941798 Brassica rapa FPsc
Brara.J00174 2.0kb upstream 2.0kb upstream 2000 false A10: 939799-941798 Brassica rapa FPsc
Brara.J00174 2.0kb downstream 2.0kb downstream 3373 true A10: 936426-939798 Brassica rapa FPsc
Brara.J00174 2.0kb downstream 2.0kb downstream 2000 false A10: 936426-938425 Brassica rapa FPsc
Brara.J00174 5.0kb upstream 5.0kb upstream 6373 true A10: 938426-944798 Brassica rapa FPsc
Brara.J00174 5.0kb upstream 5.0kb upstream 5000 false A10: 939799-944798 Brassica rapa FPsc
Brara.J00174 5.0kb downstream 5.0kb downstream 6373 true A10: 933426-939798 Brassica rapa FPsc
Brara.J00174 5.0kb downstream 5.0kb downstream 5000 false A10: 933426-938425 Brassica rapa FPsc
Brara.J00174 10.0kb upstream 10.0kb upstream 11373 true A10: 938426-949798 Brassica rapa FPsc
Brara.J00174 10.0kb upstream 10.0kb upstream 10000 false A10: 939799-949798 Brassica rapa FPsc
Brara.J00174 10.0kb downstream 10.0kb downstream 11373 true A10: 928426-939798 Brassica rapa FPsc
Brara.J00174 10.0kb downstream 10.0kb downstream 10000 false A10: 928426-938425 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369459 5261 Brassicaceae View MSA
123835229 5264 Brassicales-Malvales View MSA
124339903 5266 SBM View MSA
124250520 5268 Malvidae View MSA
124061118 5270 Rosid View MSA
123743245 5271 Pentapetalae View MSA
122795918 5272 Eudicot View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier