Gene : Brara.C00907 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.5.1.75 - tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  907
Name:  ? Brara.C00907 Secondary Identifier:  ? PAC:30618990
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2781 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00907 0.5kb upstream 0.5kb upstream 3363 true A03: 4245432-4248794 Brassica rapa FPsc
Brara.C00907 0.5kb upstream 0.5kb upstream 500 false A03: 4248295-4248794 Brassica rapa FPsc
Brara.C00907 0.5kb downstream 0.5kb downstream 3363 true A03: 4244932-4248294 Brassica rapa FPsc
Brara.C00907 0.5kb downstream 0.5kb downstream 500 false A03: 4244932-4245431 Brassica rapa FPsc
Brara.C00907 1.0kb upstream 1.0kb upstream 3863 true A03: 4245432-4249294 Brassica rapa FPsc
Brara.C00907 1.0kb upstream 1.0kb upstream 1000 false A03: 4248295-4249294 Brassica rapa FPsc
Brara.C00907 1.0kb downstream 1.0kb downstream 3863 true A03: 4244432-4248294 Brassica rapa FPsc
Brara.C00907 1.0kb downstream 1.0kb downstream 1000 false A03: 4244432-4245431 Brassica rapa FPsc
Brara.C00907 2.0kb upstream 2.0kb upstream 4863 true A03: 4245432-4250294 Brassica rapa FPsc
Brara.C00907 2.0kb upstream 2.0kb upstream 2000 false A03: 4248295-4250294 Brassica rapa FPsc
Brara.C00907 2.0kb downstream 2.0kb downstream 4863 true A03: 4243432-4248294 Brassica rapa FPsc
Brara.C00907 2.0kb downstream 2.0kb downstream 2000 false A03: 4243432-4245431 Brassica rapa FPsc
Brara.C00907 5.0kb upstream 5.0kb upstream 7863 true A03: 4245432-4253294 Brassica rapa FPsc
Brara.C00907 5.0kb upstream 5.0kb upstream 5000 false A03: 4248295-4253294 Brassica rapa FPsc
Brara.C00907 5.0kb downstream 5.0kb downstream 7863 true A03: 4240432-4248294 Brassica rapa FPsc
Brara.C00907 5.0kb downstream 5.0kb downstream 5000 false A03: 4240432-4245431 Brassica rapa FPsc
Brara.C00907 10.0kb upstream 10.0kb upstream 12863 true A03: 4245432-4258294 Brassica rapa FPsc
Brara.C00907 10.0kb upstream 10.0kb upstream 10000 false A03: 4248295-4258294 Brassica rapa FPsc
Brara.C00907 10.0kb downstream 10.0kb downstream 12863 true A03: 4235432-4248294 Brassica rapa FPsc
Brara.C00907 10.0kb downstream 10.0kb downstream 10000 false A03: 4235432-4245431 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377436 5261 Brassicaceae View MSA
123831177 5264 Brassicales-Malvales View MSA
124343005 5266 SBM View MSA
124240666 5268 Malvidae View MSA
124066214 5270 Rosid View MSA
123738978 5271 Pentapetalae View MSA
122792264 5272 Eudicot View MSA
122047791 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier