Gene : Brara.J00187 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  187
Name:  ? Brara.J00187 Secondary Identifier:  ? PAC:30611461
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CHLOROPHYLL-SYN Brassica rapa FPsc pathologic  
BrapaFPsc HEME-BIOSYNTHESIS-II Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5918 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00187 0.5kb upstream 0.5kb upstream 2459 true A10: 998217-1000675 Brassica rapa FPsc
Brara.J00187 0.5kb upstream 0.5kb upstream 500 false A10: 1000176-1000675 Brassica rapa FPsc
Brara.J00187 0.5kb downstream 0.5kb downstream 2459 true A10: 997717-1000175 Brassica rapa FPsc
Brara.J00187 0.5kb downstream 0.5kb downstream 500 false A10: 997717-998216 Brassica rapa FPsc
Brara.J00187 1.0kb upstream 1.0kb upstream 2959 true A10: 998217-1001175 Brassica rapa FPsc
Brara.J00187 1.0kb upstream 1.0kb upstream 1000 false A10: 1000176-1001175 Brassica rapa FPsc
Brara.J00187 1.0kb downstream 1.0kb downstream 2959 true A10: 997217-1000175 Brassica rapa FPsc
Brara.J00187 1.0kb downstream 1.0kb downstream 1000 false A10: 997217-998216 Brassica rapa FPsc
Brara.J00187 2.0kb upstream 2.0kb upstream 3959 true A10: 998217-1002175 Brassica rapa FPsc
Brara.J00187 2.0kb upstream 2.0kb upstream 2000 false A10: 1000176-1002175 Brassica rapa FPsc
Brara.J00187 2.0kb downstream 2.0kb downstream 3959 true A10: 996217-1000175 Brassica rapa FPsc
Brara.J00187 2.0kb downstream 2.0kb downstream 2000 false A10: 996217-998216 Brassica rapa FPsc
Brara.J00187 5.0kb upstream 5.0kb upstream 6959 true A10: 998217-1005175 Brassica rapa FPsc
Brara.J00187 5.0kb upstream 5.0kb upstream 5000 false A10: 1000176-1005175 Brassica rapa FPsc
Brara.J00187 5.0kb downstream 5.0kb downstream 6959 true A10: 993217-1000175 Brassica rapa FPsc
Brara.J00187 5.0kb downstream 5.0kb downstream 5000 false A10: 993217-998216 Brassica rapa FPsc
Brara.J00187 10.0kb upstream 10.0kb upstream 11959 true A10: 998217-1010175 Brassica rapa FPsc
Brara.J00187 10.0kb upstream 10.0kb upstream 10000 false A10: 1000176-1010175 Brassica rapa FPsc
Brara.J00187 10.0kb downstream 10.0kb downstream 11959 true A10: 988217-1000175 Brassica rapa FPsc
Brara.J00187 10.0kb downstream 10.0kb downstream 10000 false A10: 988217-998216 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367913 5261 Brassicaceae View MSA
123838034 5264 Brassicales-Malvales View MSA
124337231 5266 SBM View MSA
124243280 5268 Malvidae View MSA
124062707 5270 Rosid View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier