Gene : Brara.C00905 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR24071:SF7 - GTP-BINDING NUCLEAR PROTEIN RAN-2 Genomic Order:  905
Name:  ? Brara.C00905 Secondary Identifier:  ? PAC:30619688
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ILEUDEG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5138 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6435 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7036 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  
BrapaFPsc VALDEG-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00905 0.5kb upstream 0.5kb upstream 1918 true A03: 4240956-4242873 Brassica rapa FPsc
Brara.C00905 0.5kb upstream 0.5kb upstream 500 false A03: 4240956-4241455 Brassica rapa FPsc
Brara.C00905 0.5kb downstream 0.5kb downstream 1918 true A03: 4241456-4243373 Brassica rapa FPsc
Brara.C00905 0.5kb downstream 0.5kb downstream 500 false A03: 4242874-4243373 Brassica rapa FPsc
Brara.C00905 1.0kb upstream 1.0kb upstream 2418 true A03: 4240456-4242873 Brassica rapa FPsc
Brara.C00905 1.0kb upstream 1.0kb upstream 1000 false A03: 4240456-4241455 Brassica rapa FPsc
Brara.C00905 1.0kb downstream 1.0kb downstream 2418 true A03: 4241456-4243873 Brassica rapa FPsc
Brara.C00905 1.0kb downstream 1.0kb downstream 1000 false A03: 4242874-4243873 Brassica rapa FPsc
Brara.C00905 2.0kb upstream 2.0kb upstream 3418 true A03: 4239456-4242873 Brassica rapa FPsc
Brara.C00905 2.0kb upstream 2.0kb upstream 2000 false A03: 4239456-4241455 Brassica rapa FPsc
Brara.C00905 2.0kb downstream 2.0kb downstream 3418 true A03: 4241456-4244873 Brassica rapa FPsc
Brara.C00905 2.0kb downstream 2.0kb downstream 2000 false A03: 4242874-4244873 Brassica rapa FPsc
Brara.C00905 5.0kb upstream 5.0kb upstream 6418 true A03: 4236456-4242873 Brassica rapa FPsc
Brara.C00905 5.0kb upstream 5.0kb upstream 5000 false A03: 4236456-4241455 Brassica rapa FPsc
Brara.C00905 5.0kb downstream 5.0kb downstream 6418 true A03: 4241456-4247873 Brassica rapa FPsc
Brara.C00905 5.0kb downstream 5.0kb downstream 5000 false A03: 4242874-4247873 Brassica rapa FPsc
Brara.C00905 10.0kb upstream 10.0kb upstream 11418 true A03: 4231456-4242873 Brassica rapa FPsc
Brara.C00905 10.0kb upstream 10.0kb upstream 10000 false A03: 4231456-4241455 Brassica rapa FPsc
Brara.C00905 10.0kb downstream 10.0kb downstream 11418 true A03: 4241456-4252873 Brassica rapa FPsc
Brara.C00905 10.0kb downstream 10.0kb downstream 10000 false A03: 4242874-4252873 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371036 5261 Brassicaceae View MSA
123829338 5264 Brassicales-Malvales View MSA
124347070 5266 SBM View MSA
124237166 5268 Malvidae View MSA
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier