Gene : Brara.J00046 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  46
Name:  ? Brara.J00046 Secondary Identifier:  ? PAC:30612634
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00046 0.5kb upstream 0.5kb upstream 2937 true A10: 257539-260475 Brassica rapa FPsc
Brara.J00046 0.5kb upstream 0.5kb upstream 500 false A10: 259976-260475 Brassica rapa FPsc
Brara.J00046 0.5kb downstream 0.5kb downstream 2937 true A10: 257039-259975 Brassica rapa FPsc
Brara.J00046 0.5kb downstream 0.5kb downstream 500 false A10: 257039-257538 Brassica rapa FPsc
Brara.J00046 1.0kb upstream 1.0kb upstream 3437 true A10: 257539-260975 Brassica rapa FPsc
Brara.J00046 1.0kb upstream 1.0kb upstream 1000 false A10: 259976-260975 Brassica rapa FPsc
Brara.J00046 1.0kb downstream 1.0kb downstream 3437 true A10: 256539-259975 Brassica rapa FPsc
Brara.J00046 1.0kb downstream 1.0kb downstream 1000 false A10: 256539-257538 Brassica rapa FPsc
Brara.J00046 2.0kb upstream 2.0kb upstream 4437 true A10: 257539-261975 Brassica rapa FPsc
Brara.J00046 2.0kb upstream 2.0kb upstream 2000 false A10: 259976-261975 Brassica rapa FPsc
Brara.J00046 2.0kb downstream 2.0kb downstream 4437 true A10: 255539-259975 Brassica rapa FPsc
Brara.J00046 2.0kb downstream 2.0kb downstream 2000 false A10: 255539-257538 Brassica rapa FPsc
Brara.J00046 5.0kb upstream 5.0kb upstream 7437 true A10: 257539-264975 Brassica rapa FPsc
Brara.J00046 5.0kb upstream 5.0kb upstream 5000 false A10: 259976-264975 Brassica rapa FPsc
Brara.J00046 5.0kb downstream 5.0kb downstream 7437 true A10: 252539-259975 Brassica rapa FPsc
Brara.J00046 5.0kb downstream 5.0kb downstream 5000 false A10: 252539-257538 Brassica rapa FPsc
Brara.J00046 10.0kb upstream 10.0kb upstream 12437 true A10: 257539-269975 Brassica rapa FPsc
Brara.J00046 10.0kb upstream 10.0kb upstream 10000 false A10: 259976-269975 Brassica rapa FPsc
Brara.J00046 10.0kb downstream 10.0kb downstream 12437 true A10: 247539-259975 Brassica rapa FPsc
Brara.J00046 10.0kb downstream 10.0kb downstream 10000 false A10: 247539-257538 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027967 5273 Angiosperm View MSA
122374442 5261 Brassicaceae View MSA
123829576 5264 Brassicales-Malvales View MSA
124321608 5266 SBM View MSA
124250315 5268 Malvidae View MSA
124037204 5270 Rosid View MSA
123741083 5271 Pentapetalae View MSA
122791627 5272 Eudicot View MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier