Gene : Brara.J00045 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11751:SF380 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2-RELATED Genomic Order:  45
Name:  ? Brara.J00045 Secondary Identifier:  ? PAC:30613051
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ETHYL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00045 0.5kb upstream 0.5kb upstream 3492 true A10: 249882-253373 Brassica rapa FPsc
Brara.J00045 0.5kb upstream 0.5kb upstream 500 false A10: 252874-253373 Brassica rapa FPsc
Brara.J00045 0.5kb downstream 0.5kb downstream 3492 true A10: 249382-252873 Brassica rapa FPsc
Brara.J00045 0.5kb downstream 0.5kb downstream 500 false A10: 249382-249881 Brassica rapa FPsc
Brara.J00045 1.0kb upstream 1.0kb upstream 3992 true A10: 249882-253873 Brassica rapa FPsc
Brara.J00045 1.0kb upstream 1.0kb upstream 1000 false A10: 252874-253873 Brassica rapa FPsc
Brara.J00045 1.0kb downstream 1.0kb downstream 3992 true A10: 248882-252873 Brassica rapa FPsc
Brara.J00045 1.0kb downstream 1.0kb downstream 1000 false A10: 248882-249881 Brassica rapa FPsc
Brara.J00045 2.0kb upstream 2.0kb upstream 4992 true A10: 249882-254873 Brassica rapa FPsc
Brara.J00045 2.0kb upstream 2.0kb upstream 2000 false A10: 252874-254873 Brassica rapa FPsc
Brara.J00045 2.0kb downstream 2.0kb downstream 4992 true A10: 247882-252873 Brassica rapa FPsc
Brara.J00045 2.0kb downstream 2.0kb downstream 2000 false A10: 247882-249881 Brassica rapa FPsc
Brara.J00045 5.0kb upstream 5.0kb upstream 7992 true A10: 249882-257873 Brassica rapa FPsc
Brara.J00045 5.0kb upstream 5.0kb upstream 5000 false A10: 252874-257873 Brassica rapa FPsc
Brara.J00045 5.0kb downstream 5.0kb downstream 7992 true A10: 244882-252873 Brassica rapa FPsc
Brara.J00045 5.0kb downstream 5.0kb downstream 5000 false A10: 244882-249881 Brassica rapa FPsc
Brara.J00045 10.0kb upstream 10.0kb upstream 12992 true A10: 249882-262873 Brassica rapa FPsc
Brara.J00045 10.0kb upstream 10.0kb upstream 10000 false A10: 252874-262873 Brassica rapa FPsc
Brara.J00045 10.0kb downstream 10.0kb downstream 12992 true A10: 239882-252873 Brassica rapa FPsc
Brara.J00045 10.0kb downstream 10.0kb downstream 10000 false A10: 239882-249881 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368056 5261 Brassicaceae View MSA
123841414 5264 Brassicales-Malvales View MSA
124344234 5266 SBM View MSA
124243868 5268 Malvidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier