Gene : Brara.J00115 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Genomic Order:  115
Name:  ? Brara.J00115 Secondary Identifier:  ? PAC:30611555
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00115 0.5kb upstream 0.5kb upstream 6675 true A10: 638257-644931 Brassica rapa FPsc
Brara.J00115 0.5kb upstream 0.5kb upstream 500 false A10: 638257-638756 Brassica rapa FPsc
Brara.J00115 0.5kb downstream 0.5kb downstream 6675 true A10: 638757-645431 Brassica rapa FPsc
Brara.J00115 0.5kb downstream 0.5kb downstream 500 false A10: 644932-645431 Brassica rapa FPsc
Brara.J00115 1.0kb upstream 1.0kb upstream 7175 true A10: 637757-644931 Brassica rapa FPsc
Brara.J00115 1.0kb upstream 1.0kb upstream 1000 false A10: 637757-638756 Brassica rapa FPsc
Brara.J00115 1.0kb downstream 1.0kb downstream 7175 true A10: 638757-645931 Brassica rapa FPsc
Brara.J00115 1.0kb downstream 1.0kb downstream 1000 false A10: 644932-645931 Brassica rapa FPsc
Brara.J00115 2.0kb upstream 2.0kb upstream 8175 true A10: 636757-644931 Brassica rapa FPsc
Brara.J00115 2.0kb upstream 2.0kb upstream 2000 false A10: 636757-638756 Brassica rapa FPsc
Brara.J00115 2.0kb downstream 2.0kb downstream 8175 true A10: 638757-646931 Brassica rapa FPsc
Brara.J00115 2.0kb downstream 2.0kb downstream 2000 false A10: 644932-646931 Brassica rapa FPsc
Brara.J00115 5.0kb upstream 5.0kb upstream 11175 true A10: 633757-644931 Brassica rapa FPsc
Brara.J00115 5.0kb upstream 5.0kb upstream 5000 false A10: 633757-638756 Brassica rapa FPsc
Brara.J00115 5.0kb downstream 5.0kb downstream 11175 true A10: 638757-649931 Brassica rapa FPsc
Brara.J00115 5.0kb downstream 5.0kb downstream 5000 false A10: 644932-649931 Brassica rapa FPsc
Brara.J00115 10.0kb upstream 10.0kb upstream 16175 true A10: 628757-644931 Brassica rapa FPsc
Brara.J00115 10.0kb upstream 10.0kb upstream 10000 false A10: 628757-638756 Brassica rapa FPsc
Brara.J00115 10.0kb downstream 10.0kb downstream 16175 true A10: 638757-654931 Brassica rapa FPsc
Brara.J00115 10.0kb downstream 10.0kb downstream 10000 false A10: 644932-654931 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368465 5261 Brassicaceae View MSA
123827737 5264 Brassicales-Malvales View MSA
124337563 5266 SBM View MSA
124252870 5268 Malvidae View MSA
124067501 5270 Rosid View MSA
123746339 5271 Pentapetalae View MSA
122771871 5272 Eudicot View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier