Gene : Brara.C00767 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11999//PTHR11999:SF86 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE Genomic Order:  767
Name:  ? Brara.C00767 Secondary Identifier:  ? PAC:30615530
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUDEG-I-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY0-1305 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4321 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00767 0.5kb upstream 0.5kb upstream 1294 true A03: 3522403-3523696 Brassica rapa FPsc
Brara.C00767 0.5kb upstream 0.5kb upstream 500 false A03: 3522403-3522902 Brassica rapa FPsc
Brara.C00767 0.5kb downstream 0.5kb downstream 1294 true A03: 3522903-3524196 Brassica rapa FPsc
Brara.C00767 0.5kb downstream 0.5kb downstream 500 false A03: 3523697-3524196 Brassica rapa FPsc
Brara.C00767 1.0kb upstream 1.0kb upstream 1794 true A03: 3521903-3523696 Brassica rapa FPsc
Brara.C00767 1.0kb upstream 1.0kb upstream 1000 false A03: 3521903-3522902 Brassica rapa FPsc
Brara.C00767 1.0kb downstream 1.0kb downstream 1794 true A03: 3522903-3524696 Brassica rapa FPsc
Brara.C00767 1.0kb downstream 1.0kb downstream 1000 false A03: 3523697-3524696 Brassica rapa FPsc
Brara.C00767 2.0kb upstream 2.0kb upstream 2794 true A03: 3520903-3523696 Brassica rapa FPsc
Brara.C00767 2.0kb upstream 2.0kb upstream 2000 false A03: 3520903-3522902 Brassica rapa FPsc
Brara.C00767 2.0kb downstream 2.0kb downstream 2794 true A03: 3522903-3525696 Brassica rapa FPsc
Brara.C00767 2.0kb downstream 2.0kb downstream 2000 false A03: 3523697-3525696 Brassica rapa FPsc
Brara.C00767 5.0kb upstream 5.0kb upstream 5794 true A03: 3517903-3523696 Brassica rapa FPsc
Brara.C00767 5.0kb upstream 5.0kb upstream 5000 false A03: 3517903-3522902 Brassica rapa FPsc
Brara.C00767 5.0kb downstream 5.0kb downstream 5794 true A03: 3522903-3528696 Brassica rapa FPsc
Brara.C00767 5.0kb downstream 5.0kb downstream 5000 false A03: 3523697-3528696 Brassica rapa FPsc
Brara.C00767 10.0kb upstream 10.0kb upstream 10794 true A03: 3512903-3523696 Brassica rapa FPsc
Brara.C00767 10.0kb upstream 10.0kb upstream 10000 false A03: 3512903-3522902 Brassica rapa FPsc
Brara.C00767 10.0kb downstream 10.0kb downstream 10794 true A03: 3522903-3533696 Brassica rapa FPsc
Brara.C00767 10.0kb downstream 10.0kb downstream 10000 false A03: 3523697-3533696 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346959 5261 Brassicaceae Singleton cluster - no MSA
123786565 5264 Brassicales-Malvales Singleton cluster - no MSA
124284667 5266 SBM Singleton cluster - no MSA
124250986 5268 Malvidae View MSA
124038628 5270 Rosid View MSA
123610905 5271 Pentapetalae View MSA
122645493 5272 Eudicot View MSA
122049828 5273 Angiosperm View MSA
121311607 5274 Embryophyte View MSA
123348883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier