Gene : Brara.C00834 B. rapa FPsc v1.3
Defline:  (1 of 11) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  834
Name:  ? Brara.C00834 Secondary Identifier:  ? PAC:30616646
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00834 0.5kb upstream 0.5kb upstream 1351 true A03: 3871703-3873053 Brassica rapa FPsc
Brara.C00834 0.5kb upstream 0.5kb upstream 500 false A03: 3872554-3873053 Brassica rapa FPsc
Brara.C00834 0.5kb downstream 0.5kb downstream 1351 true A03: 3871203-3872553 Brassica rapa FPsc
Brara.C00834 0.5kb downstream 0.5kb downstream 500 false A03: 3871203-3871702 Brassica rapa FPsc
Brara.C00834 1.0kb upstream 1.0kb upstream 1851 true A03: 3871703-3873553 Brassica rapa FPsc
Brara.C00834 1.0kb upstream 1.0kb upstream 1000 false A03: 3872554-3873553 Brassica rapa FPsc
Brara.C00834 1.0kb downstream 1.0kb downstream 1851 true A03: 3870703-3872553 Brassica rapa FPsc
Brara.C00834 1.0kb downstream 1.0kb downstream 1000 false A03: 3870703-3871702 Brassica rapa FPsc
Brara.C00834 2.0kb upstream 2.0kb upstream 2851 true A03: 3871703-3874553 Brassica rapa FPsc
Brara.C00834 2.0kb upstream 2.0kb upstream 2000 false A03: 3872554-3874553 Brassica rapa FPsc
Brara.C00834 2.0kb downstream 2.0kb downstream 2851 true A03: 3869703-3872553 Brassica rapa FPsc
Brara.C00834 2.0kb downstream 2.0kb downstream 2000 false A03: 3869703-3871702 Brassica rapa FPsc
Brara.C00834 5.0kb upstream 5.0kb upstream 5851 true A03: 3871703-3877553 Brassica rapa FPsc
Brara.C00834 5.0kb upstream 5.0kb upstream 5000 false A03: 3872554-3877553 Brassica rapa FPsc
Brara.C00834 5.0kb downstream 5.0kb downstream 5851 true A03: 3866703-3872553 Brassica rapa FPsc
Brara.C00834 5.0kb downstream 5.0kb downstream 5000 false A03: 3866703-3871702 Brassica rapa FPsc
Brara.C00834 10.0kb upstream 10.0kb upstream 10851 true A03: 3871703-3882553 Brassica rapa FPsc
Brara.C00834 10.0kb upstream 10.0kb upstream 10000 false A03: 3872554-3882553 Brassica rapa FPsc
Brara.C00834 10.0kb downstream 10.0kb downstream 10851 true A03: 3861703-3872553 Brassica rapa FPsc
Brara.C00834 10.0kb downstream 10.0kb downstream 10000 false A03: 3861703-3871702 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378007 5261 Brassicaceae View MSA
123836596 5264 Brassicales-Malvales View MSA
124340857 5266 SBM View MSA
124253911 5268 Malvidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier