Gene : Brara.E02171 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR34675:SF1 - PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 2, CHLOROPLASTIC Genomic Order:  2171
Name:  ? Brara.E02171 Secondary Identifier:  ? PAC:30625038
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02171 0.5kb upstream 0.5kb upstream 2934 true A05: 19896448-19899381 Brassica rapa FPsc
Brara.E02171 0.5kb upstream 0.5kb upstream 500 false A05: 19896448-19896947 Brassica rapa FPsc
Brara.E02171 0.5kb downstream 0.5kb downstream 2934 true A05: 19896948-19899881 Brassica rapa FPsc
Brara.E02171 0.5kb downstream 0.5kb downstream 500 false A05: 19899382-19899881 Brassica rapa FPsc
Brara.E02171 1.0kb upstream 1.0kb upstream 3434 true A05: 19895948-19899381 Brassica rapa FPsc
Brara.E02171 1.0kb upstream 1.0kb upstream 1000 false A05: 19895948-19896947 Brassica rapa FPsc
Brara.E02171 1.0kb downstream 1.0kb downstream 3434 true A05: 19896948-19900381 Brassica rapa FPsc
Brara.E02171 1.0kb downstream 1.0kb downstream 1000 false A05: 19899382-19900381 Brassica rapa FPsc
Brara.E02171 2.0kb upstream 2.0kb upstream 4434 true A05: 19894948-19899381 Brassica rapa FPsc
Brara.E02171 2.0kb upstream 2.0kb upstream 2000 false A05: 19894948-19896947 Brassica rapa FPsc
Brara.E02171 2.0kb downstream 2.0kb downstream 4434 true A05: 19896948-19901381 Brassica rapa FPsc
Brara.E02171 2.0kb downstream 2.0kb downstream 2000 false A05: 19899382-19901381 Brassica rapa FPsc
Brara.E02171 5.0kb upstream 5.0kb upstream 7434 true A05: 19891948-19899381 Brassica rapa FPsc
Brara.E02171 5.0kb upstream 5.0kb upstream 5000 false A05: 19891948-19896947 Brassica rapa FPsc
Brara.E02171 5.0kb downstream 5.0kb downstream 7434 true A05: 19896948-19904381 Brassica rapa FPsc
Brara.E02171 5.0kb downstream 5.0kb downstream 5000 false A05: 19899382-19904381 Brassica rapa FPsc
Brara.E02171 10.0kb upstream 10.0kb upstream 12434 true A05: 19886948-19899381 Brassica rapa FPsc
Brara.E02171 10.0kb upstream 10.0kb upstream 10000 false A05: 19886948-19896947 Brassica rapa FPsc
Brara.E02171 10.0kb downstream 10.0kb downstream 12434 true A05: 19896948-19909381 Brassica rapa FPsc
Brara.E02171 10.0kb downstream 10.0kb downstream 10000 false A05: 19899382-19909381 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361860 5261 Brassicaceae View MSA
123827359 5264 Brassicales-Malvales View MSA
124344054 5266 SBM View MSA
124241058 5268 Malvidae View MSA
124069084 5270 Rosid View MSA
123747974 5271 Pentapetalae View MSA
122792072 5272 Eudicot View MSA
122046912 5273 Angiosperm View MSA
121344327 5274 Embryophyte View MSA
123426530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier