Gene : Brara.I05458 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31235:SF39 - PEROXIDASE 3-RELATED Genomic Order:  5458
Name:  ? Brara.I05458 Secondary Identifier:  ? PAC:30641781
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05458 0.5kb upstream 0.5kb upstream 2190 true A09: 43955945-43958134 Brassica rapa FPsc
Brara.I05458 0.5kb upstream 0.5kb upstream 500 false A09: 43957635-43958134 Brassica rapa FPsc
Brara.I05458 0.5kb downstream 0.5kb downstream 2190 true A09: 43955445-43957634 Brassica rapa FPsc
Brara.I05458 0.5kb downstream 0.5kb downstream 500 false A09: 43955445-43955944 Brassica rapa FPsc
Brara.I05458 1.0kb upstream 1.0kb upstream 2690 true A09: 43955945-43958634 Brassica rapa FPsc
Brara.I05458 1.0kb upstream 1.0kb upstream 1000 false A09: 43957635-43958634 Brassica rapa FPsc
Brara.I05458 1.0kb downstream 1.0kb downstream 2690 true A09: 43954945-43957634 Brassica rapa FPsc
Brara.I05458 1.0kb downstream 1.0kb downstream 1000 false A09: 43954945-43955944 Brassica rapa FPsc
Brara.I05458 2.0kb upstream 2.0kb upstream 3690 true A09: 43955945-43959634 Brassica rapa FPsc
Brara.I05458 2.0kb upstream 2.0kb upstream 2000 false A09: 43957635-43959634 Brassica rapa FPsc
Brara.I05458 2.0kb downstream 2.0kb downstream 3690 true A09: 43953945-43957634 Brassica rapa FPsc
Brara.I05458 2.0kb downstream 2.0kb downstream 2000 false A09: 43953945-43955944 Brassica rapa FPsc
Brara.I05458 5.0kb upstream 5.0kb upstream 6690 true A09: 43955945-43962634 Brassica rapa FPsc
Brara.I05458 5.0kb upstream 5.0kb upstream 5000 false A09: 43957635-43962634 Brassica rapa FPsc
Brara.I05458 5.0kb downstream 5.0kb downstream 6690 true A09: 43950945-43957634 Brassica rapa FPsc
Brara.I05458 5.0kb downstream 5.0kb downstream 5000 false A09: 43950945-43955944 Brassica rapa FPsc
Brara.I05458 10.0kb upstream 10.0kb upstream 11690 true A09: 43955945-43967634 Brassica rapa FPsc
Brara.I05458 10.0kb upstream 10.0kb upstream 10000 false A09: 43957635-43967634 Brassica rapa FPsc
Brara.I05458 10.0kb downstream 10.0kb downstream 11690 true A09: 43945945-43957634 Brassica rapa FPsc
Brara.I05458 10.0kb downstream 10.0kb downstream 10000 false A09: 43945945-43955944 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369858 5261 Brassicaceae View MSA
123838755 5264 Brassicales-Malvales View MSA
124341557 5266 SBM View MSA
124250593 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier