Gene : Brara.C00692 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11831:SF1 - U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3 Genomic Order:  692
Name:  ? Brara.C00692 Secondary Identifier:  ? PAC:30616118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00692 0.5kb upstream 0.5kb upstream 2138 true A03: 3164506-3166643 Brassica rapa FPsc
Brara.C00692 0.5kb upstream 0.5kb upstream 500 false A03: 3164506-3165005 Brassica rapa FPsc
Brara.C00692 0.5kb downstream 0.5kb downstream 2138 true A03: 3165006-3167143 Brassica rapa FPsc
Brara.C00692 0.5kb downstream 0.5kb downstream 500 false A03: 3166644-3167143 Brassica rapa FPsc
Brara.C00692 1.0kb upstream 1.0kb upstream 2638 true A03: 3164006-3166643 Brassica rapa FPsc
Brara.C00692 1.0kb upstream 1.0kb upstream 1000 false A03: 3164006-3165005 Brassica rapa FPsc
Brara.C00692 1.0kb downstream 1.0kb downstream 2638 true A03: 3165006-3167643 Brassica rapa FPsc
Brara.C00692 1.0kb downstream 1.0kb downstream 1000 false A03: 3166644-3167643 Brassica rapa FPsc
Brara.C00692 2.0kb upstream 2.0kb upstream 3638 true A03: 3163006-3166643 Brassica rapa FPsc
Brara.C00692 2.0kb upstream 2.0kb upstream 2000 false A03: 3163006-3165005 Brassica rapa FPsc
Brara.C00692 2.0kb downstream 2.0kb downstream 3638 true A03: 3165006-3168643 Brassica rapa FPsc
Brara.C00692 2.0kb downstream 2.0kb downstream 2000 false A03: 3166644-3168643 Brassica rapa FPsc
Brara.C00692 5.0kb upstream 5.0kb upstream 6638 true A03: 3160006-3166643 Brassica rapa FPsc
Brara.C00692 5.0kb upstream 5.0kb upstream 5000 false A03: 3160006-3165005 Brassica rapa FPsc
Brara.C00692 5.0kb downstream 5.0kb downstream 6638 true A03: 3165006-3171643 Brassica rapa FPsc
Brara.C00692 5.0kb downstream 5.0kb downstream 5000 false A03: 3166644-3171643 Brassica rapa FPsc
Brara.C00692 10.0kb upstream 10.0kb upstream 11638 true A03: 3155006-3166643 Brassica rapa FPsc
Brara.C00692 10.0kb upstream 10.0kb upstream 10000 false A03: 3155006-3165005 Brassica rapa FPsc
Brara.C00692 10.0kb downstream 10.0kb downstream 11638 true A03: 3165006-3176643 Brassica rapa FPsc
Brara.C00692 10.0kb downstream 10.0kb downstream 10000 false A03: 3166644-3176643 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374223 5261 Brassicaceae View MSA
123827414 5264 Brassicales-Malvales View MSA
124346220 5266 SBM View MSA
124238648 5268 Malvidae View MSA
124067940 5270 Rosid View MSA
123740372 5271 Pentapetalae View MSA
122792450 5272 Eudicot View MSA
122044096 5273 Angiosperm View MSA
121345167 5274 Embryophyte View MSA
123424004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier