Gene : Brara.E02107 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  2107
Name:  ? Brara.E02107 Secondary Identifier:  ? PAC:30624049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02107 0.5kb upstream 0.5kb upstream 1047 true A05: 19306577-19307623 Brassica rapa FPsc
Brara.E02107 0.5kb upstream 0.5kb upstream 500 false A05: 19306577-19307076 Brassica rapa FPsc
Brara.E02107 0.5kb downstream 0.5kb downstream 1047 true A05: 19307077-19308123 Brassica rapa FPsc
Brara.E02107 0.5kb downstream 0.5kb downstream 500 false A05: 19307624-19308123 Brassica rapa FPsc
Brara.E02107 1.0kb upstream 1.0kb upstream 1547 true A05: 19306077-19307623 Brassica rapa FPsc
Brara.E02107 1.0kb upstream 1.0kb upstream 1000 false A05: 19306077-19307076 Brassica rapa FPsc
Brara.E02107 1.0kb downstream 1.0kb downstream 1547 true A05: 19307077-19308623 Brassica rapa FPsc
Brara.E02107 1.0kb downstream 1.0kb downstream 1000 false A05: 19307624-19308623 Brassica rapa FPsc
Brara.E02107 2.0kb upstream 2.0kb upstream 2547 true A05: 19305077-19307623 Brassica rapa FPsc
Brara.E02107 2.0kb upstream 2.0kb upstream 2000 false A05: 19305077-19307076 Brassica rapa FPsc
Brara.E02107 2.0kb downstream 2.0kb downstream 2547 true A05: 19307077-19309623 Brassica rapa FPsc
Brara.E02107 2.0kb downstream 2.0kb downstream 2000 false A05: 19307624-19309623 Brassica rapa FPsc
Brara.E02107 5.0kb upstream 5.0kb upstream 5547 true A05: 19302077-19307623 Brassica rapa FPsc
Brara.E02107 5.0kb upstream 5.0kb upstream 5000 false A05: 19302077-19307076 Brassica rapa FPsc
Brara.E02107 5.0kb downstream 5.0kb downstream 5547 true A05: 19307077-19312623 Brassica rapa FPsc
Brara.E02107 5.0kb downstream 5.0kb downstream 5000 false A05: 19307624-19312623 Brassica rapa FPsc
Brara.E02107 10.0kb upstream 10.0kb upstream 10547 true A05: 19297077-19307623 Brassica rapa FPsc
Brara.E02107 10.0kb upstream 10.0kb upstream 10000 false A05: 19297077-19307076 Brassica rapa FPsc
Brara.E02107 10.0kb downstream 10.0kb downstream 10547 true A05: 19307077-19317623 Brassica rapa FPsc
Brara.E02107 10.0kb downstream 10.0kb downstream 10000 false A05: 19307624-19317623 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349271 5261 Brassicaceae Singleton cluster - no MSA
123840325 5264 Brassicales-Malvales View MSA
124349006 5266 SBM View MSA
124249733 5268 Malvidae View MSA
124063108 5270 Rosid View MSA
123738637 5271 Pentapetalae View MSA
122793683 5272 Eudicot View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier