Gene : Brara.I05369 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR10126 - TATA-BOX BINDING PROTEIN Genomic Order:  5369
Name:  ? Brara.I05369 Secondary Identifier:  ? PAC:30643405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05369 0.5kb upstream 0.5kb upstream 1132 true A09: 43561395-43562526 Brassica rapa FPsc
Brara.I05369 0.5kb upstream 0.5kb upstream 500 false A09: 43562027-43562526 Brassica rapa FPsc
Brara.I05369 0.5kb downstream 0.5kb downstream 1132 true A09: 43560895-43562026 Brassica rapa FPsc
Brara.I05369 0.5kb downstream 0.5kb downstream 500 false A09: 43560895-43561394 Brassica rapa FPsc
Brara.I05369 1.0kb upstream 1.0kb upstream 1632 true A09: 43561395-43563026 Brassica rapa FPsc
Brara.I05369 1.0kb upstream 1.0kb upstream 1000 false A09: 43562027-43563026 Brassica rapa FPsc
Brara.I05369 1.0kb downstream 1.0kb downstream 1632 true A09: 43560395-43562026 Brassica rapa FPsc
Brara.I05369 1.0kb downstream 1.0kb downstream 1000 false A09: 43560395-43561394 Brassica rapa FPsc
Brara.I05369 2.0kb upstream 2.0kb upstream 2632 true A09: 43561395-43564026 Brassica rapa FPsc
Brara.I05369 2.0kb upstream 2.0kb upstream 2000 false A09: 43562027-43564026 Brassica rapa FPsc
Brara.I05369 2.0kb downstream 2.0kb downstream 2632 true A09: 43559395-43562026 Brassica rapa FPsc
Brara.I05369 2.0kb downstream 2.0kb downstream 2000 false A09: 43559395-43561394 Brassica rapa FPsc
Brara.I05369 5.0kb upstream 5.0kb upstream 5632 true A09: 43561395-43567026 Brassica rapa FPsc
Brara.I05369 5.0kb upstream 5.0kb upstream 5000 false A09: 43562027-43567026 Brassica rapa FPsc
Brara.I05369 5.0kb downstream 5.0kb downstream 5632 true A09: 43556395-43562026 Brassica rapa FPsc
Brara.I05369 5.0kb downstream 5.0kb downstream 5000 false A09: 43556395-43561394 Brassica rapa FPsc
Brara.I05369 10.0kb upstream 10.0kb upstream 10632 true A09: 43561395-43572026 Brassica rapa FPsc
Brara.I05369 10.0kb upstream 10.0kb upstream 10000 false A09: 43562027-43572026 Brassica rapa FPsc
Brara.I05369 10.0kb downstream 10.0kb downstream 10632 true A09: 43551395-43562026 Brassica rapa FPsc
Brara.I05369 10.0kb downstream 10.0kb downstream 10000 false A09: 43551395-43561394 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353895 5261 Brassicaceae Singleton cluster - no MSA
123792379 5264 Brassicales-Malvales Singleton cluster - no MSA
124290255 5266 SBM Singleton cluster - no MSA
124143432 5268 Malvidae Singleton cluster - no MSA
124042026 5270 Rosid View MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier