Gene : Brara.C00715 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12975 - TRANSPORT PROTEIN TRAPP Genomic Order:  715
Name:  ? Brara.C00715 Secondary Identifier:  ? PAC:30615595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00715 0.5kb upstream 0.5kb upstream 8168 true A03: 3269226-3277393 Brassica rapa FPsc
Brara.C00715 0.5kb upstream 0.5kb upstream 500 false A03: 3276894-3277393 Brassica rapa FPsc
Brara.C00715 0.5kb downstream 0.5kb downstream 8168 true A03: 3268726-3276893 Brassica rapa FPsc
Brara.C00715 0.5kb downstream 0.5kb downstream 500 false A03: 3268726-3269225 Brassica rapa FPsc
Brara.C00715 1.0kb upstream 1.0kb upstream 8668 true A03: 3269226-3277893 Brassica rapa FPsc
Brara.C00715 1.0kb upstream 1.0kb upstream 1000 false A03: 3276894-3277893 Brassica rapa FPsc
Brara.C00715 1.0kb downstream 1.0kb downstream 8668 true A03: 3268226-3276893 Brassica rapa FPsc
Brara.C00715 1.0kb downstream 1.0kb downstream 1000 false A03: 3268226-3269225 Brassica rapa FPsc
Brara.C00715 2.0kb upstream 2.0kb upstream 9668 true A03: 3269226-3278893 Brassica rapa FPsc
Brara.C00715 2.0kb upstream 2.0kb upstream 2000 false A03: 3276894-3278893 Brassica rapa FPsc
Brara.C00715 2.0kb downstream 2.0kb downstream 9668 true A03: 3267226-3276893 Brassica rapa FPsc
Brara.C00715 2.0kb downstream 2.0kb downstream 2000 false A03: 3267226-3269225 Brassica rapa FPsc
Brara.C00715 5.0kb upstream 5.0kb upstream 12668 true A03: 3269226-3281893 Brassica rapa FPsc
Brara.C00715 5.0kb upstream 5.0kb upstream 5000 false A03: 3276894-3281893 Brassica rapa FPsc
Brara.C00715 5.0kb downstream 5.0kb downstream 12668 true A03: 3264226-3276893 Brassica rapa FPsc
Brara.C00715 5.0kb downstream 5.0kb downstream 5000 false A03: 3264226-3269225 Brassica rapa FPsc
Brara.C00715 10.0kb upstream 10.0kb upstream 17668 true A03: 3269226-3286893 Brassica rapa FPsc
Brara.C00715 10.0kb upstream 10.0kb upstream 10000 false A03: 3276894-3286893 Brassica rapa FPsc
Brara.C00715 10.0kb downstream 10.0kb downstream 17668 true A03: 3259226-3276893 Brassica rapa FPsc
Brara.C00715 10.0kb downstream 10.0kb downstream 10000 false A03: 3259226-3269225 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579424 5273 Angiosperm View MSA
122356378 5261 Brassicaceae View MSA
123794502 5264 Brassicales-Malvales View MSA
124292306 5266 SBM View MSA
124251163 5268 Malvidae View MSA
123952576 5270 Rosid View MSA
123530301 5271 Pentapetalae View MSA
122565267 5272 Eudicot View MSA
120851885 5274 Embryophyte View MSA
122893049 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier