Gene : Brara.I05391 B. rapa FPsc v1.3
Defline:  (1 of 2) 5.2.1.13 - Prolycopene isomerase / CRTISO Genomic Order:  5391
Name:  ? Brara.I05391 Secondary Identifier:  ? PAC:30646493
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CAROTENOID-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6475 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05391 0.5kb upstream 0.5kb upstream 3807 true A09: 43656486-43660292 Brassica rapa FPsc
Brara.I05391 0.5kb upstream 0.5kb upstream 500 false A09: 43656486-43656985 Brassica rapa FPsc
Brara.I05391 0.5kb downstream 0.5kb downstream 3807 true A09: 43656986-43660792 Brassica rapa FPsc
Brara.I05391 0.5kb downstream 0.5kb downstream 500 false A09: 43660293-43660792 Brassica rapa FPsc
Brara.I05391 1.0kb upstream 1.0kb upstream 4307 true A09: 43655986-43660292 Brassica rapa FPsc
Brara.I05391 1.0kb upstream 1.0kb upstream 1000 false A09: 43655986-43656985 Brassica rapa FPsc
Brara.I05391 1.0kb downstream 1.0kb downstream 4307 true A09: 43656986-43661292 Brassica rapa FPsc
Brara.I05391 1.0kb downstream 1.0kb downstream 1000 false A09: 43660293-43661292 Brassica rapa FPsc
Brara.I05391 2.0kb upstream 2.0kb upstream 5307 true A09: 43654986-43660292 Brassica rapa FPsc
Brara.I05391 2.0kb upstream 2.0kb upstream 2000 false A09: 43654986-43656985 Brassica rapa FPsc
Brara.I05391 2.0kb downstream 2.0kb downstream 5307 true A09: 43656986-43662292 Brassica rapa FPsc
Brara.I05391 2.0kb downstream 2.0kb downstream 2000 false A09: 43660293-43662292 Brassica rapa FPsc
Brara.I05391 5.0kb upstream 5.0kb upstream 8307 true A09: 43651986-43660292 Brassica rapa FPsc
Brara.I05391 5.0kb upstream 5.0kb upstream 5000 false A09: 43651986-43656985 Brassica rapa FPsc
Brara.I05391 5.0kb downstream 5.0kb downstream 8307 true A09: 43656986-43665292 Brassica rapa FPsc
Brara.I05391 5.0kb downstream 5.0kb downstream 5000 false A09: 43660293-43665292 Brassica rapa FPsc
Brara.I05391 10.0kb upstream 10.0kb upstream 13307 true A09: 43646986-43660292 Brassica rapa FPsc
Brara.I05391 10.0kb upstream 10.0kb upstream 10000 false A09: 43646986-43656985 Brassica rapa FPsc
Brara.I05391 10.0kb downstream 10.0kb downstream 13307 true A09: 43656986-43670292 Brassica rapa FPsc
Brara.I05391 10.0kb downstream 10.0kb downstream 10000 false A09: 43660293-43670292 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026345 5273 Angiosperm View MSA
122362908 5261 Brassicaceae View MSA
123831028 5264 Brassicales-Malvales View MSA
124343687 5266 SBM View MSA
124242220 5268 Malvidae View MSA
124064637 5270 Rosid View MSA
123738016 5271 Pentapetalae View MSA
122791420 5272 Eudicot View MSA
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier