Gene : Brara.C00737 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR14217:SF5 - INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 Genomic Order:  737
Name:  ? Brara.C00737 Secondary Identifier:  ? PAC:30615633
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6365 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6366 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6554 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00737 0.5kb upstream 0.5kb upstream 2053 true A03: 3355377-3357429 Brassica rapa FPsc
Brara.C00737 0.5kb upstream 0.5kb upstream 500 false A03: 3355377-3355876 Brassica rapa FPsc
Brara.C00737 0.5kb downstream 0.5kb downstream 2053 true A03: 3355877-3357929 Brassica rapa FPsc
Brara.C00737 0.5kb downstream 0.5kb downstream 500 false A03: 3357430-3357929 Brassica rapa FPsc
Brara.C00737 1.0kb upstream 1.0kb upstream 2553 true A03: 3354877-3357429 Brassica rapa FPsc
Brara.C00737 1.0kb upstream 1.0kb upstream 1000 false A03: 3354877-3355876 Brassica rapa FPsc
Brara.C00737 1.0kb downstream 1.0kb downstream 2553 true A03: 3355877-3358429 Brassica rapa FPsc
Brara.C00737 1.0kb downstream 1.0kb downstream 1000 false A03: 3357430-3358429 Brassica rapa FPsc
Brara.C00737 2.0kb upstream 2.0kb upstream 3553 true A03: 3353877-3357429 Brassica rapa FPsc
Brara.C00737 2.0kb upstream 2.0kb upstream 2000 false A03: 3353877-3355876 Brassica rapa FPsc
Brara.C00737 2.0kb downstream 2.0kb downstream 3553 true A03: 3355877-3359429 Brassica rapa FPsc
Brara.C00737 2.0kb downstream 2.0kb downstream 2000 false A03: 3357430-3359429 Brassica rapa FPsc
Brara.C00737 5.0kb upstream 5.0kb upstream 6553 true A03: 3350877-3357429 Brassica rapa FPsc
Brara.C00737 5.0kb upstream 5.0kb upstream 5000 false A03: 3350877-3355876 Brassica rapa FPsc
Brara.C00737 5.0kb downstream 5.0kb downstream 6553 true A03: 3355877-3362429 Brassica rapa FPsc
Brara.C00737 5.0kb downstream 5.0kb downstream 5000 false A03: 3357430-3362429 Brassica rapa FPsc
Brara.C00737 10.0kb upstream 10.0kb upstream 11553 true A03: 3345877-3357429 Brassica rapa FPsc
Brara.C00737 10.0kb upstream 10.0kb upstream 10000 false A03: 3345877-3355876 Brassica rapa FPsc
Brara.C00737 10.0kb downstream 10.0kb downstream 11553 true A03: 3355877-3367429 Brassica rapa FPsc
Brara.C00737 10.0kb downstream 10.0kb downstream 10000 false A03: 3357430-3367429 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346990 5261 Brassicaceae Singleton cluster - no MSA
123839978 5264 Brassicales-Malvales View MSA
124343476 5266 SBM View MSA
124253590 5268 Malvidae View MSA
124070914 5270 Rosid View MSA
123749813 5271 Pentapetalae View MSA
122787239 5272 Eudicot View MSA
122047492 5273 Angiosperm View MSA
121347186 5274 Embryophyte View MSA
123428803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier