Gene : Brara.I05407 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12741:SF16 - CALLOSE SYNTHASE 7-RELATED Genomic Order:  5407
Name:  ? Brara.I05407 Secondary Identifier:  ? PAC:30642802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6773 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05407 0.5kb upstream 0.5kb upstream 10662 true A09: 43712034-43722695 Brassica rapa FPsc
Brara.I05407 0.5kb upstream 0.5kb upstream 500 false A09: 43722196-43722695 Brassica rapa FPsc
Brara.I05407 0.5kb downstream 0.5kb downstream 10662 true A09: 43711534-43722195 Brassica rapa FPsc
Brara.I05407 0.5kb downstream 0.5kb downstream 500 false A09: 43711534-43712033 Brassica rapa FPsc
Brara.I05407 1.0kb upstream 1.0kb upstream 11162 true A09: 43712034-43723195 Brassica rapa FPsc
Brara.I05407 1.0kb upstream 1.0kb upstream 1000 false A09: 43722196-43723195 Brassica rapa FPsc
Brara.I05407 1.0kb downstream 1.0kb downstream 11162 true A09: 43711034-43722195 Brassica rapa FPsc
Brara.I05407 1.0kb downstream 1.0kb downstream 1000 false A09: 43711034-43712033 Brassica rapa FPsc
Brara.I05407 2.0kb upstream 2.0kb upstream 12162 true A09: 43712034-43724195 Brassica rapa FPsc
Brara.I05407 2.0kb upstream 2.0kb upstream 2000 false A09: 43722196-43724195 Brassica rapa FPsc
Brara.I05407 2.0kb downstream 2.0kb downstream 12162 true A09: 43710034-43722195 Brassica rapa FPsc
Brara.I05407 2.0kb downstream 2.0kb downstream 2000 false A09: 43710034-43712033 Brassica rapa FPsc
Brara.I05407 5.0kb upstream 5.0kb upstream 15162 true A09: 43712034-43727195 Brassica rapa FPsc
Brara.I05407 5.0kb upstream 5.0kb upstream 5000 false A09: 43722196-43727195 Brassica rapa FPsc
Brara.I05407 5.0kb downstream 5.0kb downstream 15162 true A09: 43707034-43722195 Brassica rapa FPsc
Brara.I05407 5.0kb downstream 5.0kb downstream 5000 false A09: 43707034-43712033 Brassica rapa FPsc
Brara.I05407 10.0kb upstream 10.0kb upstream 20162 true A09: 43712034-43732195 Brassica rapa FPsc
Brara.I05407 10.0kb upstream 10.0kb upstream 10000 false A09: 43722196-43732195 Brassica rapa FPsc
Brara.I05407 10.0kb downstream 10.0kb downstream 20162 true A09: 43702034-43722195 Brassica rapa FPsc
Brara.I05407 10.0kb downstream 10.0kb downstream 10000 false A09: 43702034-43712033 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030611 5273 Angiosperm View MSA
122356144 5261 Brassicaceae View MSA
123794289 5264 Brassicales-Malvales View MSA
124292101 5266 SBM View MSA
124144919 5268 Malvidae View MSA
124041791 5270 Rosid View MSA
123758192 5271 Pentapetalae View MSA
122779173 5272 Eudicot View MSA
121299759 5274 Embryophyte View MSA
123337596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier