Gene : Brara.E02536 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR24095:SF52 - ACYL-COA SYNTHETASE FAMILY MEMBER 3, MITOCHONDRIAL Genomic Order:  2536
Name:  ? Brara.E02536 Secondary Identifier:  ? PAC:30626780
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-321 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5143 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5147 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5885 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-389 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6733 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6803 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02536 0.5kb upstream 0.5kb upstream 4549 true A05: 22527948-22532496 Brassica rapa FPsc
Brara.E02536 0.5kb upstream 0.5kb upstream 500 false A05: 22531997-22532496 Brassica rapa FPsc
Brara.E02536 0.5kb downstream 0.5kb downstream 4549 true A05: 22527448-22531996 Brassica rapa FPsc
Brara.E02536 0.5kb downstream 0.5kb downstream 500 false A05: 22527448-22527947 Brassica rapa FPsc
Brara.E02536 1.0kb upstream 1.0kb upstream 5049 true A05: 22527948-22532996 Brassica rapa FPsc
Brara.E02536 1.0kb upstream 1.0kb upstream 1000 false A05: 22531997-22532996 Brassica rapa FPsc
Brara.E02536 1.0kb downstream 1.0kb downstream 5049 true A05: 22526948-22531996 Brassica rapa FPsc
Brara.E02536 1.0kb downstream 1.0kb downstream 1000 false A05: 22526948-22527947 Brassica rapa FPsc
Brara.E02536 2.0kb upstream 2.0kb upstream 6049 true A05: 22527948-22533996 Brassica rapa FPsc
Brara.E02536 2.0kb upstream 2.0kb upstream 2000 false A05: 22531997-22533996 Brassica rapa FPsc
Brara.E02536 2.0kb downstream 2.0kb downstream 6049 true A05: 22525948-22531996 Brassica rapa FPsc
Brara.E02536 2.0kb downstream 2.0kb downstream 2000 false A05: 22525948-22527947 Brassica rapa FPsc
Brara.E02536 5.0kb upstream 5.0kb upstream 9049 true A05: 22527948-22536996 Brassica rapa FPsc
Brara.E02536 5.0kb upstream 5.0kb upstream 5000 false A05: 22531997-22536996 Brassica rapa FPsc
Brara.E02536 5.0kb downstream 5.0kb downstream 9049 true A05: 22522948-22531996 Brassica rapa FPsc
Brara.E02536 5.0kb downstream 5.0kb downstream 5000 false A05: 22522948-22527947 Brassica rapa FPsc
Brara.E02536 10.0kb upstream 10.0kb upstream 14049 true A05: 22527948-22541996 Brassica rapa FPsc
Brara.E02536 10.0kb upstream 10.0kb upstream 10000 false A05: 22531997-22541996 Brassica rapa FPsc
Brara.E02536 10.0kb downstream 10.0kb downstream 14049 true A05: 22517948-22531996 Brassica rapa FPsc
Brara.E02536 10.0kb downstream 10.0kb downstream 10000 false A05: 22517948-22527947 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026195 5273 Angiosperm View MSA
122364884 5261 Brassicaceae View MSA
123829585 5264 Brassicales-Malvales View MSA
124344412 5266 SBM View MSA
124239562 5268 Malvidae View MSA
124061502 5270 Rosid View MSA
123737714 5271 Pentapetalae View MSA
122789528 5272 Eudicot View MSA
121347572 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier