Gene : Brara.J01255 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR10336:SF92 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 2-RELATED Genomic Order:  1255
Name:  ? Brara.J01255 Secondary Identifier:  ? PAC:30611865
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6367 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7039 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01255 0.5kb upstream 0.5kb upstream 3357 true A10: 11562389-11565745 Brassica rapa FPsc
Brara.J01255 0.5kb upstream 0.5kb upstream 500 false A10: 11565246-11565745 Brassica rapa FPsc
Brara.J01255 0.5kb downstream 0.5kb downstream 3357 true A10: 11561889-11565245 Brassica rapa FPsc
Brara.J01255 0.5kb downstream 0.5kb downstream 500 false A10: 11561889-11562388 Brassica rapa FPsc
Brara.J01255 1.0kb upstream 1.0kb upstream 3857 true A10: 11562389-11566245 Brassica rapa FPsc
Brara.J01255 1.0kb upstream 1.0kb upstream 1000 false A10: 11565246-11566245 Brassica rapa FPsc
Brara.J01255 1.0kb downstream 1.0kb downstream 3857 true A10: 11561389-11565245 Brassica rapa FPsc
Brara.J01255 1.0kb downstream 1.0kb downstream 1000 false A10: 11561389-11562388 Brassica rapa FPsc
Brara.J01255 2.0kb upstream 2.0kb upstream 4857 true A10: 11562389-11567245 Brassica rapa FPsc
Brara.J01255 2.0kb upstream 2.0kb upstream 2000 false A10: 11565246-11567245 Brassica rapa FPsc
Brara.J01255 2.0kb downstream 2.0kb downstream 4857 true A10: 11560389-11565245 Brassica rapa FPsc
Brara.J01255 2.0kb downstream 2.0kb downstream 2000 false A10: 11560389-11562388 Brassica rapa FPsc
Brara.J01255 5.0kb upstream 5.0kb upstream 7857 true A10: 11562389-11570245 Brassica rapa FPsc
Brara.J01255 5.0kb upstream 5.0kb upstream 5000 false A10: 11565246-11570245 Brassica rapa FPsc
Brara.J01255 5.0kb downstream 5.0kb downstream 7857 true A10: 11557389-11565245 Brassica rapa FPsc
Brara.J01255 5.0kb downstream 5.0kb downstream 5000 false A10: 11557389-11562388 Brassica rapa FPsc
Brara.J01255 10.0kb upstream 10.0kb upstream 12857 true A10: 11562389-11575245 Brassica rapa FPsc
Brara.J01255 10.0kb upstream 10.0kb upstream 10000 false A10: 11565246-11575245 Brassica rapa FPsc
Brara.J01255 10.0kb downstream 10.0kb downstream 12857 true A10: 11552389-11565245 Brassica rapa FPsc
Brara.J01255 10.0kb downstream 10.0kb downstream 10000 false A10: 11552389-11562388 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579393 5273 Angiosperm View MSA
122375123 5261 Brassicaceae View MSA
123800885 5264 Brassicales-Malvales View MSA
124298245 5266 SBM View MSA
124250349 5268 Malvidae View MSA
123952492 5270 Rosid View MSA
123530260 5271 Pentapetalae View MSA
122565227 5272 Eudicot View MSA
120851856 5274 Embryophyte View MSA
122893022 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier