Gene : Brara.C01614 B. rapa FPsc v1.3
Defline:  (1 of 6) 1.11.1.12 - Phospholipid-hydroperoxide glutathione peroxidase / Peroxidation-inhibiting protein Genomic Order:  1614
Name:  ? Brara.C01614 Secondary Identifier:  ? PAC:30615433
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01614 0.5kb upstream 0.5kb upstream 2450 true A03: 7836000-7838449 Brassica rapa FPsc
Brara.C01614 0.5kb upstream 0.5kb upstream 500 false A03: 7837950-7838449 Brassica rapa FPsc
Brara.C01614 0.5kb downstream 0.5kb downstream 2450 true A03: 7835500-7837949 Brassica rapa FPsc
Brara.C01614 0.5kb downstream 0.5kb downstream 500 false A03: 7835500-7835999 Brassica rapa FPsc
Brara.C01614 1.0kb upstream 1.0kb upstream 2950 true A03: 7836000-7838949 Brassica rapa FPsc
Brara.C01614 1.0kb upstream 1.0kb upstream 1000 false A03: 7837950-7838949 Brassica rapa FPsc
Brara.C01614 1.0kb downstream 1.0kb downstream 2950 true A03: 7835000-7837949 Brassica rapa FPsc
Brara.C01614 1.0kb downstream 1.0kb downstream 1000 false A03: 7835000-7835999 Brassica rapa FPsc
Brara.C01614 2.0kb upstream 2.0kb upstream 3950 true A03: 7836000-7839949 Brassica rapa FPsc
Brara.C01614 2.0kb upstream 2.0kb upstream 2000 false A03: 7837950-7839949 Brassica rapa FPsc
Brara.C01614 2.0kb downstream 2.0kb downstream 3950 true A03: 7834000-7837949 Brassica rapa FPsc
Brara.C01614 2.0kb downstream 2.0kb downstream 2000 false A03: 7834000-7835999 Brassica rapa FPsc
Brara.C01614 5.0kb upstream 5.0kb upstream 6950 true A03: 7836000-7842949 Brassica rapa FPsc
Brara.C01614 5.0kb upstream 5.0kb upstream 5000 false A03: 7837950-7842949 Brassica rapa FPsc
Brara.C01614 5.0kb downstream 5.0kb downstream 6950 true A03: 7831000-7837949 Brassica rapa FPsc
Brara.C01614 5.0kb downstream 5.0kb downstream 5000 false A03: 7831000-7835999 Brassica rapa FPsc
Brara.C01614 10.0kb upstream 10.0kb upstream 11950 true A03: 7836000-7847949 Brassica rapa FPsc
Brara.C01614 10.0kb upstream 10.0kb upstream 10000 false A03: 7837950-7847949 Brassica rapa FPsc
Brara.C01614 10.0kb downstream 10.0kb downstream 11950 true A03: 7826000-7837949 Brassica rapa FPsc
Brara.C01614 10.0kb downstream 10.0kb downstream 10000 false A03: 7826000-7835999 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346933 5261 Brassicaceae Singleton cluster - no MSA
123786546 5264 Brassicales-Malvales Singleton cluster - no MSA
124284648 5266 SBM Singleton cluster - no MSA
124254095 5268 Malvidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier