Gene : Brara.C01628 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR30239:SF3 - ACETOLACTATE SYNTHASE SMALL SUBUNIT 2, CHLOROPLASTIC Genomic Order:  1628
Name:  ? Brara.C01628 Secondary Identifier:  ? PAC:30615734
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc BRANCHED-CHAIN-AA-SYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ILEUSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  
BrapaFPsc VALSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01628 0.5kb upstream 0.5kb upstream 4616 true A03: 7904499-7909114 Brassica rapa FPsc
Brara.C01628 0.5kb upstream 0.5kb upstream 500 false A03: 7904499-7904998 Brassica rapa FPsc
Brara.C01628 0.5kb downstream 0.5kb downstream 4616 true A03: 7904999-7909614 Brassica rapa FPsc
Brara.C01628 0.5kb downstream 0.5kb downstream 500 false A03: 7909115-7909614 Brassica rapa FPsc
Brara.C01628 1.0kb upstream 1.0kb upstream 5116 true A03: 7903999-7909114 Brassica rapa FPsc
Brara.C01628 1.0kb upstream 1.0kb upstream 1000 false A03: 7903999-7904998 Brassica rapa FPsc
Brara.C01628 1.0kb downstream 1.0kb downstream 5116 true A03: 7904999-7910114 Brassica rapa FPsc
Brara.C01628 1.0kb downstream 1.0kb downstream 1000 false A03: 7909115-7910114 Brassica rapa FPsc
Brara.C01628 2.0kb upstream 2.0kb upstream 6116 true A03: 7902999-7909114 Brassica rapa FPsc
Brara.C01628 2.0kb upstream 2.0kb upstream 2000 false A03: 7902999-7904998 Brassica rapa FPsc
Brara.C01628 2.0kb downstream 2.0kb downstream 6116 true A03: 7904999-7911114 Brassica rapa FPsc
Brara.C01628 2.0kb downstream 2.0kb downstream 2000 false A03: 7909115-7911114 Brassica rapa FPsc
Brara.C01628 5.0kb upstream 5.0kb upstream 9116 true A03: 7899999-7909114 Brassica rapa FPsc
Brara.C01628 5.0kb upstream 5.0kb upstream 5000 false A03: 7899999-7904998 Brassica rapa FPsc
Brara.C01628 5.0kb downstream 5.0kb downstream 9116 true A03: 7904999-7914114 Brassica rapa FPsc
Brara.C01628 5.0kb downstream 5.0kb downstream 5000 false A03: 7909115-7914114 Brassica rapa FPsc
Brara.C01628 10.0kb upstream 10.0kb upstream 14116 true A03: 7894999-7909114 Brassica rapa FPsc
Brara.C01628 10.0kb upstream 10.0kb upstream 10000 false A03: 7894999-7904998 Brassica rapa FPsc
Brara.C01628 10.0kb downstream 10.0kb downstream 14116 true A03: 7904999-7919114 Brassica rapa FPsc
Brara.C01628 10.0kb downstream 10.0kb downstream 10000 false A03: 7909115-7919114 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122372730 5261 Brassicaceae View MSA
123828720 5264 Brassicales-Malvales View MSA
124341997 5266 SBM View MSA
124249637 5268 Malvidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier